SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0P5XDH2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0P5XDH2
Domain Number 1 Region: 998-1303
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.15e-36
Family WD40-repeat 0.0053
Further Details:      
 
Domain Number 2 Region: 3-109
Classification Level Classification E-value
Superfamily BEACH domain 1.7e-35
Family BEACH domain 0.00042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0P5XDH2
Sequence length 1306
Comment (tr|A0A0P5XDH2|A0A0P5XDH2_9CRUS) WD repeat-containing protein {ECO:0000313|EMBL:JAM29982.1} OX=35525 OS=Daphnia magna. GN= OC=Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
Sequence
MQQWTPDECIPQFFSDPSVFKSIHDDLPDLNYPSWASSAEDFIIKHRNALESPYVSERLH
QWIDLTFGFRLSGSAAVKAKNVHLSLVDGHVNLSTRGVIQLFSQPHPRKLLPSPYVGRSP
PRLPPAEEQLCLPLDYNPVGLLRQLETLSHFHGPTQVDSHDLAAVTIAGRRQRDLQWLVT
LAVELFIPERFRLLRQNATLEERWQICQDIIRFDRHLVPRCLRAFIQTVFHNETVTAQGL
PPPSAHQLLQPMVSLIPFPSEFPAVLRATRRLRQLFENENMDFSEAGKIISSFSNLSSIS
LLIPFVKALLLKSSTAFRAALYLLDPIATALGPYETAKEFLHIILKIMGPEQPSAPLVLL
YHKRFLLMLQVRLGLRCFLQNISLLVVEGVGGCYNADGVTAVQQLLVAPSTLSLSSSLDR
LKLGKEQEQESERELETGDXXXXXXXXXXXXXXXXXXXXXXXXXGDVFTFEVGEEAALLE
QSSGEDTGTISGTPSRNSVKYSQANAAYPVRDIYDLDGCTVSQVSVDSLLWQAHRLGPVL
TARHLTRNLLRMIALCYAEGNSLNLADSSQESSPFQISGALLQGDFNANRILGCLASIAG
LYGEQFVMLQYFPHAAEVVSRCIGSGTISVMLEGGLIGSCSLILACIPCLQDSNFMLCLR
EVLLRQLLDPIVCTVTSSEQIFARGGAARSALSIKLLDCLCAVAIRIGSDAAGEIISEPA
LKLLKSFNRVGKVASSSSISRTHTVKGRPDYMCHQRRLSNTLRQAQAAAEIEAASPPPSN
TITRPAANEALSLAEMAATFXXXXXXXXXXXXXXXSNTITRPAANEALSLAEMAATFTDH
FAFQLLTALNLILGVRHVQSLVEQGGQAAQACATQYASTKDTLEADSELASQRRTSVFSG
LRVNRSFSSEAETTAGSSYGSRISVVGNRIQLFAEEEPVLETTTEQCDSRPTLEEAQEML
SYRKTDSARHLRGNWLAYWEHEAGRADRDTRFNFKQIRLLQLNGHSAGIRTIHVMDSEIG
MLTAGRDKTARVWSLHSQGDGNNCVSASYVYQQHRKPLLGVCFIDTARLAASCDGAVHLW
DPFVGTSVRQLDASSSCKFPTVTAMKALPAQTVLVTATAEGTLRMLDTRSPSTYQQELRI
SPVAAGLVRCLATGSNGYWVAAGHSSGILSLMDTRTGMLLASWKGHEGEVLQVNGWTSPN
GSQHLISSSLDQSISVWSADDGKLKFNFRGTSEPVHCLCTTGGGELVTGTTANRIGVYTS
LTSNANFSSTKLRSDTFKGVLTAMAVVPLNRMLLLGSDSGVVSLLC
Download sequence
Identical sequences A0A0P5XDH2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]