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Domain assignment for A0A0U3PGL1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0U3PGL1
Domain Number 1 Region: 6-152
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.94e-44
Family Ribonuclease PH domain 1-like 0.000000545
Further Details:      
 
Domain Number 2 Region: 325-497
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.61e-44
Family Ribonuclease PH domain 1-like 0.000000437
Further Details:      
 
Domain Number 3 Region: 153-265
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.25e-24
Family Ribonuclease PH domain 2-like 0.00000804
Further Details:      
 
Domain Number 4 Region: 479-577
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.78e-22
Family Ribonuclease PH domain 2-like 0.0000149
Further Details:      
 
Domain Number 5 Region: 587-673
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.75e-18
Family Eukaryotic type KH-domain (KH-domain type I) 0.0037
Further Details:      
 
Domain Number 6 Region: 270-350
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 2.59e-17
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.00034
Further Details:      
 
Domain Number 7 Region: 653-726
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000000000143
Family Cold shock DNA-binding domain-like 0.00025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0U3PGL1
Sequence length 746
Comment (tr|A0A0U3PGL1|A0A0U3PGL1_9MICC) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome; Reference proteome OX=595593 OS=Arthrobacter sp. A3. GN=MB46_03810 OC=Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.
Sequence
MEGPEIQYSEAVIDNGRYGKRVVRFETGRLAQQAAGAAMVYIDEDTVLLSATSAGKQPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLAINPDVLYDVVAINASSMSTQLSGLPFSGPIGGVRVALIDDGQGPQWVAFPKHS
ELENAVFNMVVAGKVAGDDVAIMMVEAEATDNSWKLIKEQGHQAPTEEIVSEGLEAAKPF
IKALCDAQADLAARAAKPTVTFPIFLDYEDDAYAAVEQASATKLAAVFTIADKQERDNAS
DALKDETIAALAGDFAGREKELSAAFRSVTKHVIRQRILTEQIRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQILGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLL
NAGVPLKAPVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTAEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILSVLTSAIDVPDELSEFAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQIPEIGERYL
GTVVKTTTFGAFISLTPGKDGLLHISELRKLANGKRVDNVDDVVSVGQKIQVEITKIDDR
GKLSLSPVVADEENATEEVAAESAAE
Download sequence
Identical sequences A0A0U3PGL1
WP_044579109.1.74484

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