SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for A0A0V1CLJ3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0V1CLJ3
Domain Number 1 Region: 5-258
Classification Level Classification E-value
Superfamily Subunits of heterodimeric actin filament capping protein Capz 1.02e-78
Family Capz beta-1 subunit 0.00000004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0V1CLJ3
Sequence length 276
Comment (tr|A0A0V1CLJ3|A0A0V1CLJ3_TRIBR) F-actin-capping protein subunit beta {ECO:0000313|EMBL:KRY50169.1} KW=Complete proteome; Reference proteome OX=45882 OS=Trichinella britovi (Parasitic roundworm). GN=T03_4853 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MTQNRLDFALDLMRRLPPQKCEGFLGCLIELVPDMCGELLSNVDQPLKVATDSTCGKQFL
LSDYNRDGDSYRSPWSNQYFPPFEDGSVPIDRLRKIEIDANHAIEQYKDMYFDSGVSSVY
AWDLEHSFACAILIKKDGDAKKMANGSWDSIHIIEVQEKSSGRSAHYKLTSTIMLWLLTE
SSGRPKIDLSGSLTRQSESDAPLIDSYSHVINMGKMIEEMENKMRGSLNTIYFGKTYDII
SCLRSMETKQERDEQAQLQQELARAIHCRQDSFKKE
Download sequence
Identical sequences A0A0V1CLJ3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]