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Domain assignment for A0A0V1CRR0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0V1CRR0
Domain Number 1 Region: 2498-2799
Classification Level Classification E-value
Superfamily BEACH domain 2.22e-102
Family BEACH domain 0.000000199
Further Details:      
 
Domain Number 2 Region: 2966-3182
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.75e-19
Family WD40-repeat 0.009
Further Details:      
 
Domain Number 3 Region: 2395-2496
Classification Level Classification E-value
Superfamily PH domain-like 0.000000000393
Family PreBEACH PH-like domain 0.021
Further Details:      
 
Domain Number 4 Region: 270-409,495-736,808-871,928-1015,1243-1264
Classification Level Classification E-value
Superfamily ARM repeat 0.000000299
Family MIF4G domain-like 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0V1CRR0
Sequence length 3204
Comment (tr|A0A0V1CRR0|A0A0V1CRR0_TRIBR) Lysosomal-trafficking regulator {ECO:0000313|EMBL:KRY52005.1} KW=Complete proteome; Reference proteome OX=45882 OS=Trichinella britovi (Parasitic roundworm). GN=T03_18189 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MSDQFTTFENAFLKKVAISQPYLCQFLVEKFEEYLYVLNEGILTSQQAWPVLNEDYLPLC
CVLSLCKWKNVQKPNSMAEIVWNVIKTLLTDEDESVTFSTPLSEANLKLLNLLFHYAGDQ
DLLEQKRKLLDYSSVVRRTAEDSKKSNFFIKERRAYVKWKRSRRMCLDDSNFSNERQSNI
WKPLYCTSTSSGDVSESGRPHGRISRMKHDSSSQPCLETNLWYWFVEDSDGFLWDSSVIF
HAADLTHIIGRQLRRQCRLFQSCSFDQLDKQTACCILLNLLARCINWCSTEDAILSTIIH
DCTEWILQSCGVLSELHHMDGYLWLVRFVCKLISWMPVSGDYYFPSIRIAQQVNNFVWKL
LQCIVVDQLHNCIPSTAADQSELLSDVIFTACRAVVDNLLILIFQMSAQRHLCDRMPALV
DLIDSSLSSRMLLDIPLQVVSSDVPRLLSSLDAWNRYLRDALVAIVDRLLKLNRLAQHQG
WCSKSKHISCGLLAVAEESTDCITSVGSCCVILRIEEIVFELVRRTRDNAPDDRFHMIRA
LFEFQSCSCSGVVRYLDLLVEMLPRCGSAVDRRMLRRCIFGKLLKQRSNNTLWNDCERFD
LASSFGQLFDQLNLCEQLPLLNLLTEAASKLTSDYKAQLFAGFALPQLLNACRTDNFPVR
LVRALYRLCSTTITASNYPTLVEHFELFESHLREIELDLVSAELLIEAARVERHVQEPHL
VSISDRILMQTIRVLNLVISDVRLLAMDNCNDRVTFWSAPARLTYLCSRLWPLPHFAVSF
CQRGGVELIHGLVASVIHYSTRRRLDLDATFFSYVEHLLYITVGFCASITPADSKIANTF
FSRVRNQLMGDLTERNPNNLLAVAEILLRTFVAVQLAESGNLLDRIKVDSGSSSGMSTQS
EEDVAAYSCVSYSSAKETALQIVGNSYSIEKYSLAIGQWSIIIVAGLLKRGIENVGKFFQ
RLQRYCVRYPTMMKILLEHPTSIENFTTILKTIPQCWTCEHVSPILEAMLTIFLSINDHN
GLRLAFQLADQYGSHTILTLLRILDQSLQECKFDPKYLLPLNFPWPDDYSHSSCSTTASA
LAAACEKKSSGQQLLDLSFNSTCSSYYTSMLRMIRMKTSAPVMINLKKYVKRANMRQGLS
VGIWLRCGIVGNFFNQACKRREQAHVVSIGNAKLLCSVNVGLPGLELILSLNFNGQQVVS
YKCGSLHADRWCLLFLQMRYANQKLFIQLNFNDSRIFRRETHWNAEGDDDDDDDDEEEEQ
GVEDGTDAFRHFAIALFGRRKLFRLFGHVASINVFNECLSDNYCTLLYELGPRRCNLALN
ENGELLNLNLYCCSSKRKLYSLFDDEDALIRLSERLVAVMTGQKMIQFCAYPNKRYALNC
LCNVVVDHDDTTRSDRQQQTLLIDIVDPCGSTQLYNFLQSCGSAMILLYLVIQVLHKPID
EQSRSFALRFLVLCVQRNPIWRDEFVKMLGPAMLSYFTGESQFPVGSDFVKTLFDLCVSC
SHSGCPLICEVEILFQMLTSFQLWRNGLEQFAEALLLLANLLEASSENVTICNQFSLIKR
LLNLICIYIRITGKDFSSSLINAITRVVQAVLSAGIWFTEVSAVIEFLFYCHDASRVTVQ
YPFCNAFTWINLSLIETFVNGLLKIRDECENELLIKDDCGFMSSMHLYDAASVTKQLHNT
TISDVFSKYQLFASAGKMFFELIEPSLRPSSKGIETFPAFVRLKCEILHLLIAHMNNIEN
GEQLTNVPNCDIRWEYLIVMLRQQVDRQTVGYLVELLAVTLHWFSDDQKKQFLNVRGFDL
LRNQLYQLPTSITVINSLLQLVLGGQTSYFSNNNNNKFEDQQLFQDHISNLMTIDEFQTE
ALSVLVAQLECAIVDCTTFNSLIDLLTEISKNDQIASTLWRVGLTDCLVAALMKLPRLNV
EKDEDRQQQVMVNVRGAWRRFAVSVFRKALLSAEEQVFKCAAVGFLELLMLADLQLYVGG
KVVKQKLIRDELVNLLGELLTTYRQVSWLKRWDDRKSSTSCRRHRCSSGEAGESEIMASR
LEDRLVECLELCNNFILFMPPNVGPDNDEELLLFQSYFSFLIDLIPDSFLLTKDPPNGPK
KRLAIFALVKNLFVFLVHPSILLTFRQLWDRLHGNFRQTAGNCCDCSRRFVMVEQLQRNP
KAREVLKSFLSTLPEYRDLLLHIFCDFSVCTTLTEADKAALAAFLRLDFLQASSVSSSKL
SSSGQCKIELAPAKSSLKKFYHLTCSWVSGMFERKKRILQDSQTRLHSTNEQASDVNRFT
VYMHDVITSEYASFEHNSNRLAENVLWQWRFIEKSLCHPQGIFYSPKKWPNRWYLDPLHL
PGYSRVRFTPDVMDNDSEFYRSQETGSSIKGCSSFWLDKLFATSTLLPFDTEGGVLHSFN
TIMVTLFFEATGTLLLYRDKIHFLSNNCCTVQKRIPLNKKVSTSWNYSQLILLNCLRFHA
ADSAVEMFFDTLESCLFVFDSPANRAEAVDHLKTFSPSLQQQASLQMLSTFTEAWRYGRM
TNFDYIITLNELAGRTFNDITQYPVFPFILNDYLNYTIDLKQPTLYRDLSLPVAVQNSKS
RTYYSERYEALSSASLDQNVPLSEPYHFSALYSNSGVVLYYMIRVPPFSNLALEYHDNTF
DMPDRLFHSINTTWNMASWDWRGDNKELIPEFFTLPEMFINTQNFNLGIRHNGERVHDVI
MPNWCPEKDPRLFVLIHRQALESDAVSKRLSHWIDLIFGYRQSGQAAVEAFNVYHPCTSW
KNVRFEELGDEIFSNALHAMVKTFGQLPLQLFTKPHPPRTISINNDSNSTTASAAAPRPP
PTSEYSFCPARGLRWGNYVGSPEGQAPRLICAPTVVIDAPSQLAHVFILPCGNLVFVPDK
VALVAVYPCKLNPNRTFFSSVRQQVRLRTPVSIVSLRFDFADCVIKLKFEHLPTSAGRIS
ESDLSELNDLMLAYDFQVTAYSSFVETTVFCFGTDLGTLNVVRLKWDYFPNVVKHLQPQN
LQANCTVLKTLYGHSASVSTVAQSTEHGIIVSGSAAGELFVWDLNRLCFVRKLTGHEGTL
SLCAISSGSSSSCDIVSVSDEDVGSELILHTVNGRLVGRVHSSVTICSLALSTLAEGVSI
NCIAAGLQNGVIKIWDRWKLSLIQELRSDEVLRPVISLAYTCNCSQLVALLNDNTIICWD
KNADTTKSATNHFKERLSRALRIT
Download sequence
Identical sequences A0A0V1CRR0

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