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Domain assignment for A0A0V1CSC4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0V1CSC4
Domain Number 1 Region: 2509-2810
Classification Level Classification E-value
Superfamily BEACH domain 2.35e-102
Family BEACH domain 0.000000199
Further Details:      
 
Domain Number 2 Region: 2977-3193
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.81e-19
Family WD40-repeat 0.009
Further Details:      
 
Domain Number 3 Region: 2406-2507
Classification Level Classification E-value
Superfamily PH domain-like 0.000000000393
Family PreBEACH PH-like domain 0.021
Further Details:      
 
Domain Number 4 Region: 270-409,495-736,808-877,933-1020,1254-1275
Classification Level Classification E-value
Superfamily ARM repeat 0.00000109
Family MIF4G domain-like 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0V1CSC4
Sequence length 3215
Comment (tr|A0A0V1CSC4|A0A0V1CSC4_TRIBR) Lysosomal-trafficking regulator {ECO:0000313|EMBL:KRY52002.1} KW=Complete proteome; Reference proteome OX=45882 OS=Trichinella britovi (Parasitic roundworm). GN=T03_18189 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MSDQFTTFENAFLKKVAISQPYLCQFLVEKFEEYLYVLNEGILTSQQAWPVLNEDYLPLC
CVLSLCKWKNVQKPNSMAEIVWNVIKTLLTDEDESVTFSTPLSEANLKLLNLLFHYAGDQ
DLLEQKRKLLDYSSVVRRTAEDSKKSNFFIKERRAYVKWKRSRRMCLDDSNFSNERQSNI
WKPLYCTSTSSGDVSESGRPHGRISRMKHDSSSQPCLETNLWYWFVEDSDGFLWDSSVIF
HAADLTHIIGRQLRRQCRLFQSCSFDQLDKQTACCILLNLLARCINWCSTEDAILSTIIH
DCTEWILQSCGVLSELHHMDGYLWLVRFVCKLISWMPVSGDYYFPSIRIAQQVNNFVWKL
LQCIVVDQLHNCIPSTAADQSELLSDVIFTACRAVVDNLLILIFQMSAQRHLCDRMPALV
DLIDSSLSSRMLLDIPLQVVSSDVPRLLSSLDAWNRYLRDALVAIVDRLLKLNRLAQHQG
WCSKSKHISCGLLAVAEESTDCITSVGSCCVILRIEEIVFELVRRTRDNAPDDRFHMIRA
LFEFQSCSCSGVVRYLDLLVEMLPRCGSAVDRRMLRRCIFGKLLKQRSNNTLWNDCERFD
LASSFGQLFDQLNLCEQLPLLNLLTEAASKLTSDYKAQLFAGFALPQLLNACRTDNFPVR
LVRALYRLCSTTITASNYPTLVEHFELFESHLREIELDLVSAELLIEAARVERHVQEPHL
VSISDRILMQTIRVLNLVISDVRLLAMDNCNDRVTFWSAPARLTYLCSRLWPLPHFAVSF
CQRGGVELIHGLVASVIHYSTRRRLDLDATFFSYVEHLLYITVGFCASITPADSKIVNRS
IANTFFSRVRNQLMGDLTERNPNNLLAVAEILLRTFVAVQLAESGNLLDRIKVDSGSSSG
MSTQSEEDVAAYSCVSYSSAKETALQIVGNSYSIEKYSLAIGQWSIIIVAGLLKRGIENV
GKFFQRLQRYCVRYPTMMKILLEHPTSIENFTTILKTIPQCWTCEHVSPILEAMLTIFLS
INDHNGLRLAFQLADQYGSHTILTLLRILDQSLQECKFDPKYLLPLNFPWPDDYSHSSCS
TTASALAAACEKKSSGQHFIFIYRLLDLSFNSTCSSYYTSMLRMIRMKTSAPVMINLKKY
VKRANMRQGLSVGIWLRCGIVGNFFNQACKRREQAHVVSIGNAKLLCSVNVGLPGLELIL
SLNFNGQQVVSYKCGSLHADRWCLLFLQMRYANQKLFIQLNFNDSRIFRRETHWNAEGDD
DDDDDDEEEEQGVEDGTDAFRHFAIALFGRRKLFRLFGHVASINVFNECLSDNYCTLLYE
LGPRRCNLALNENGELLNLNLYCCSSKRKLYSLFDDEDALIRLSERLVAVMTGQKMIQFC
AYPNKRYALNCLCNVVVDHDDTTRSDRQQQTLLIDIVDPCGSTQLYNFLQSCGSAMILLY
LVIQVLHKPIDEQSRSFALRFLVLCVQRNPIWRDEFVKMLGPAMLSYFTGESQFPVGSDF
VKTLFDLCVSCSHSGCPLICEVEILFQMLTSFQLWRNGLEQFAEALLLLANLLEASSENV
TICNQFSLIKRLLNLICIYIRITGKDFSSSLINAITRVVQAVLSAGIWFTEVSAVIEFLF
YCHDASRVTVQYPFCNAFTWINLSLIETFVNGLLKIRDECENELLIKDDCGFMSSMHLYD
AASVTKQLHNTTISDVFSKYQLFASAGKMFFELIEPSLRPSSKGIETFPAFVRLKCEILH
LLIAHMNNIENGEQLTNVPNCDIRWEYLIVMLRQQVDRQTVGYLVELLAVTLHWFSDDQK
KQFLNVRGFDLLRNQLYQLPTSITVINSLLQLVLGGQTSYFSNNNNNKFEDQQLFQDHIS
NLMTIDEFQTEALSVLVAQLECAIVDCTTFNSLIDLLTEISKNDQIASTLWRVGLTDCLV
AALMKLPRLNVEKDEDRQQQVMVNVRGAWRRFAVSVFRKALLSAEEQVFKCAAVGFLELL
MLADLQLYVGGKVVKQKLIRDELVNLLGELLTTYRQVSWLKRWDDRKSSTSCRRHRCSSG
EAGESEIMASRLEDRLVECLELCNNFILFMPPNVGPDNDEELLLFQSYFSFLIDLIPDSF
LLTKDPPNGPKKRLAIFALVKNLFVFLVHPSILLTFRQLWDRLHGNFRQTAGNCCDCSRR
FVMVEQLQRNPKAREVLKSFLSTLPEYRDLLLHIFCDFSVCTTLTEADKAALAAFLRLDF
LQASSVSSSKLSSSGQCKIELAPAKSSLKKFYHLTCSWVSGMFERKKRILQDSQTRLHST
NEQASDVNRFTVYMHDVITSEYASFEHNSNRLAENVLWQWRFIEKSLCHPQGIFYSPKKW
PNRWYLDPLHLPGYSRVRFTPDVMDNDSEFYRSQETGSSIKGCSSFWLDKLFATSTLLPF
DTEGGVLHSFNTIMVTLFFEATGTLLLYRDKIHFLSNNCCTVQKRIPLNKKVSTSWNYSQ
LILLNCLRFHAADSAVEMFFDTLESCLFVFDSPANRAEAVDHLKTFSPSLQQQASLQMLS
TFTEAWRYGRMTNFDYIITLNELAGRTFNDITQYPVFPFILNDYLNYTIDLKQPTLYRDL
SLPVAVQNSKSRTYYSERYEALSSASLDQNVPLSEPYHFSALYSNSGVVLYYMIRVPPFS
NLALEYHDNTFDMPDRLFHSINTTWNMASWDWRGDNKELIPEFFTLPEMFINTQNFNLGI
RHNGERVHDVIMPNWCPEKDPRLFVLIHRQALESDAVSKRLSHWIDLIFGYRQSGQAAVE
AFNVYHPCTSWKNVRFEELGDEIFSNALHAMVKTFGQLPLQLFTKPHPPRTISINNDSNS
TTASAAAPRPPPTSEYSFCPARGLRWGNYVGSPEGQAPRLICAPTVVIDAPSQLAHVFIL
PCGNLVFVPDKVALVAVYPCKLNPNRTFFSSVRQQVRLRTPVSIVSLRFDFADCVIKLKF
EHLPTSAGRISESDLSELNDLMLAYDFQVTAYSSFVETTVFCFGTDLGTLNVVRLKWDYF
PNVVKHLQPQNLQANCTVLKTLYGHSASVSTVAQSTEHGIIVSGSAAGELFVWDLNRLCF
VRKLTGHEGTLSLCAISSGSSSSCDIVSVSDEDVGSELILHTVNGRLVGRVHSSVTICSL
ALSTLAEGVSINCIAAGLQNGVIKIWDRWKLSLIQELRSDEVLRPVISLAYTCNCSQLVA
LLNDNTIICWDKNADTTKSATNHFKERLSRALRIT
Download sequence
Identical sequences A0A0V1CSC4

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