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Domain assignment for A0A0V1LSS4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0V1LSS4
Domain Number 1 Region: 49-222
Classification Level Classification E-value
Superfamily MIR domain 3.53e-50
Family MIR domain 0.00000876
Further Details:      
 
Domain Number 2 Region: 425-491
Classification Level Classification E-value
Superfamily RING/U-box 1.86e-20
Family RING finger domain, C3HC4 0.0051
Further Details:      
 
Domain Number 3 Region: 294-370
Classification Level Classification E-value
Superfamily PA domain 0.000000000366
Family PA domain 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0V1LSS4
Sequence length 634
Comment (tr|A0A0V1LSS4|A0A0V1LSS4_9BILA) Stromal cell-derived factor 2 {ECO:0000313|EMBL:KRZ62575.1} KW=Complete proteome; Reference proteome OX=6335 OS=Trichinella nativa. GN=T02_1350 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MVNQRQLKIQLDARVYFVFEMIRKQTMGIVNTVLIALLLICEVFGEADDYIGCTSVVKLL
NVKIDRRLHSHDVRYGSGSGQQSVTGIADKDDKGSYWVVLAAHDNICQRGQPIACNSVIR
FQHSSTGCLLHSHSAFACPFSGNQEVSCFGKNGIGDEGDNWIVLCDKKYWEIGDEVQFKH
LQTDHYLGMSSRKYDRPIVGQNEVCAFRSDSFPTIWKAVEGIYMKKTGHYRLLYFRSNET
DVEFFDDCTASSATFGLAIVAEEVTMCTLAVEPILACGQLPPAPTHFNSTPFCISGYYAI
ARRGNCSFAKKAFNAQKAGYSGLFIYNDYDEVFPMAGDGIYEKKVTIPALMISRTCGLKL
INDYPSKDGYGVLIRLWWSYNNALKFLIPLVAVIGVSFLILLSVVSFRWFRNQQRLQRRR
LTRRQLKKIPNRKYKKGDEHEMCAICLEDFADGDKMRLLPCGHVYHCACVDPWLLKNRKV
CPVCKRKVTDDSDDSDWDSADEQPAAPSEHSPLFSNLSSSRSSSAGDLQVGNSTFYTNYG
STGCGLCPYSFCRPRAEHDDEVSTVPVSSGGQQQQQQHAVASTSSASTGVDNLSFVQDSI
SISSVAADPSEPTASTSYPAPSSSSDPPTMTQLP
Download sequence
Identical sequences A0A0V1LSS4

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