SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0V1PI41 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0V1PI41
Domain Number 1 Region: 125-243
Classification Level Classification E-value
Superfamily Elongation factor TFIIS domain 2 9.02e-18
Family Elongation factor TFIIS domain 2 0.0053
Further Details:      
 
Domain Number 2 Region: 22-97
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.000000000929
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.0048
Further Details:      
 
Domain Number 3 Region: 161-246,337-544
Classification Level Classification E-value
Superfamily ARM repeat 0.00000000749
Family HEAT repeat 0.036
Further Details:      
 
Domain Number 4 Region: 885-1056,1106-1150,1498-1614,1698-1794
Classification Level Classification E-value
Superfamily ARM repeat 0.0000000709
Family Regulatory subunit H of the V-type ATPase 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0V1PI41
Sequence length 3161
Comment (tr|A0A0V1PI41|A0A0V1PI41_9BILA) Huntingtin {ECO:0000313|EMBL:KRZ95820.1} KW=Complete proteome; Reference proteome OX=92180 OS=Trichinella sp. T8. GN=T08_4690 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MTNNVQRQRLEFRVREIENELSEMLDKNALNKTKMRKLLEELRTYGGIDVDMLVSTNIGK
TVNRIRTTFVKCPELFENATFLVKKWKKEVNALSTSSRRKSLSKSTSQSSDDMDQFSTSE
LCSQSTTNFPLFNLSSPVRHNSCRALFDSIRSNLNNCRAVFEDCDANLLNDNNIKTIVQQ
IEESIYELNGSDETNSKYCSEIRSHAMNLCNSKNCQLLRDILTGKILPANFAKMTTEEMA
PEEVKNMRKAVERDSLKEHMLSNEGSLLHSTTFHCRQCGQRDCNYTVSYEKDGHEAEAVT
YVVCNQCGHRMEKLMKNLESLRRPTNMLKKEAVPLTKEKAALFYQVAEALSSNTLKQHAE
YGKAFGNAFTILFSYCDDPCTDVRILTEETMNIIIRSCINEWNISRVHSELCKELKRNGS
ARCIRSAMGKFVEIVELIGIQKRRQFAITLIPLFEQIIKRPEEMIQDCIGSTIARLLQTL
GRYFRDEEIHGLIHSALANLQLQSTLFRRVAATFITELCHNSRRRSDMISYWFKYILTKV
TKQDCDDVFHLLGNLLTLKMFIPLVLKEQQIDQQYSTNVGGGQRVKQISSENFVQLCEAI
LFYTAVPNDVVNTLALEMLVKIFENSTETQCAIWLSKNSVKKSRFFFPSADCDLTSTADV
EPVRSESISSASCSDDPTALQQDAAVEQPVLNISFQGDDCLERRVQRFSASSDDQSQFGE
RESLESICIGRLKYSGLQRSIESVDERLALMEMDEEAKSNQQQSNGRKFDEHSHSSSTCA
SISGASVNSGKTFDKSTISTVADWAKDEFDSLLAETTSMAQFCCRLICRRFLLSGQAGVT
LPDEKVRVSHKVLSLATLERLFTLDHALYNLSLYEGCSQNISDVLLLCKHLDPQVRGFVS
QAVASLLISTATAVQSRKWNNDDDQEFKEEMKVLKRFLEILSNATRDESNVCIHYTLSSL
RRTFSIMQKLNPSEVVNCAHSLLRLASNPYWLVKVKLAECFEELDFCLISLLEETCYSNL
TEKLQPAVLHCLIDQLLVDEDRRVSSAASTSLLKLIPRLYFFGNVTLVSLNRQYYGRTFS
GRQNWLHPDLPTVHNSALDYSSPSDLHYNALLIDDIEHNLSIVIDLLYSTFYKTSAQVFD
WFGCIVALDELATAYPPRVYRRAWSTTTTTNGKCLACPLMQHCLQLLRTDCFQLDPLISW
QRILHFVSTLFAACVVDFESQPTNKKKNIVELYGLTDVAADLIAFTMQVTSMYWHVVEQR
TATPTSTARFVKSGSGSSTTLSSPVIKKLKYPTFIRKEISIKLHLGRGDSGVGERSGRFS
EGGYEPQLLKLFEILRRVGSNFRATIDAETEKKFLGLLGSALQALSAVLEAVSVVDFSGY
LEDFLFFSKSLMPLMPAQLISTLTQVIKVLFGTNLHFEKQLRVKRTQDSIVNQAKTLQSC
SNYEHFLENIQTHITQKTARSMMRHNYVEDSLICHVGWLENNYSQYVSQLFQDSERKSFL
SEAIQLFEPILMEGLRMYTVQSDGRFQAAFVGLICHLLLVKVNYSVLDPQRRILNLFCQQ
LEHYIEDDSCVDREFVCKLFELLIILSHERQNTVPFVEIPKIIQLVESMYTSKDNPLLGN
IAMHYVVLDLFLLRQQDVGNNELEIQQEVVIAMLTKALQYAEVGGDHLMVSWDSFNVIMF
QMKKFDERRWRKISRDLTDRLLPLLLEGKIEIKNSNSVNALYQLLDMVCSRAYSPVDPIF
SALCFLAAECEHNTLNKWKHLLAVTCLFRILFLHCPGDSLLDRANEVLPSLKANQQLAPW
MNYHTDTKPEELIVRLILRLSEWYLVSFVDSAVADVSPNNHQLELQMIVNFYETIFWINQ
SGMHPKLTAVFRFEEHFVRIIDQLEIASRTGEAVLLFQLCHISAVLCNSEWHLNELISRI
ISLVGNFGHLQRSAEKSNEQKHNNDGFVVFEIVVAQGGVWDFFRLCRRDGFRTATQMEHS
CETMLYNFKRTIDSSSMTIGQQLKMIELLKYSCERYSLIALHLEISLVQSKHYLVRRCAE
QSACRRLLSMMSKSTQELQRMTGVELLLKDIIYATSKNSFTLLFKNGELRSLMVKFVNDN
LHPAFGLSRRLPSELSGRAAAGCSDTGHSFDKLDVLHLLKTDVSADVGAPTDRWSRFAKA
AQCFTVEDVRSILCDQVNIPGAALRACLKLARRRFALSCDGGDQNNCGAAPDREFSRNMP
KLFTAGKEAVIFALQNLIRQFPADAVARFQFSQWEVDLTLPIGYREKAFSMHSSVQELFS
IISAASWRLSTSEISIILDFVHISFLTCLKLLPDLSLHEATATLATFLTVLANQHCCTFF
TDQPQNVVHSIIGCTFWMLVKSFRLSALLRRLPSKLPFTQGSIFFFFSVGSLFCRLSGIG
FSVNETEKMSFLYCEAMLAFRRSRRLYEQVQDALISDTIIGVCRLPQVFSFCLTPFAAFP
FGWVPDVKRIGDLCTFSNVPVRFLVHADVLKDFIYRVCLLGWSSKQQFEEIWMTLVAVLS
ATPIGKEMSHRDRLVGSGFCYLYRITIWLFISKDTVDRVTASSLAVRCIGCIFTMTSPRL
VLTPVNNWKRAAQFRPPCSFQSEPTWNKRCAEIAHLIKFELESSSSLEMQADLQLPCSFC
DVEKLYESAKLLNRAQIINSNIASGGSIVTPNLRESFDLVSCMYFVIDLFDHWFKDGPDQ
VPLLLLISTLDAIVCLSDFFFEDAHSEWMTNHMNVVFQARSADDEFITNVILFGILKCAA
NLCSSNAESLKMILQVVDHGCKIPFQSNKMFMLFGLLQSLRSFPSADVACFLPNIGELIL
HTFQLMSDRQAVNNVQVCGLDYEVACCALACQMMEKLADEHGTVDYLKTLLKLAAEAYQS
PLPHCLQNAVATVLQTLVRFPAMNFECRQQILTVTTKCFDVEPGNSYIFTSLTLMLISLH
FIKNWFNNQADDDQQRHQLDTSASDQSKATFHIMVMERFDIILRKIAQSATEITNVLGVV
CCEFLKDNFSPSDVIHKLVLDFMSNMKSADQQKVLIDILCSVLKDFQSKDEPTIFNWILL
LVPSIVEKRPSNLAISCLTCFFLSIFKEPWMEALRIIALNRLGKMEEFDTELFAFTVKRF
KELLPNEILVNDFLAIFANFSIQYPNTAYSLAHQYCMTKKT
Download sequence
Identical sequences A0A0V1PI41

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]