SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A146R887 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A146R887
Domain Number 1 Region: 125-368
Classification Level Classification E-value
Superfamily vWA-like 1.8e-67
Family Integrin A (or I) domain 0.00000179
Further Details:      
 
Domain Number 2 Region: 1254-1438
Classification Level Classification E-value
Superfamily Fibronectin type III 3.26e-40
Family Fibronectin type III 0.0000272
Further Details:      
 
Domain Number 3 Region: 1606-1807
Classification Level Classification E-value
Superfamily Fibronectin type III 1.03e-33
Family Fibronectin type III 0.001
Further Details:      
 
Domain Number 4 Region: 625-711
Classification Level Classification E-value
Superfamily Integrin beta tail domain 2.22e-17
Family Integrin beta tail domain 0.0031
Further Details:      
 
Domain Number 5 Region: 998-1116
Classification Level Classification E-value
Superfamily CalX-like 0.00000000000000471
Family CalX-beta domain 0.0024
Further Details:      
 
Domain Number 6 Region: 1118-1221
Classification Level Classification E-value
Superfamily CalX-like 0.000000000000955
Family CalX-beta domain 0.012
Further Details:      
 
Domain Number 7 Region: 27-76
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000022
Family Plexin repeat 0.0015
Further Details:      
 
Domain Number 8 Region: 540-577
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000363
Family Integrin beta EGF-like domains 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A146R887
Sequence length 1900
Comment (tr|A0A146R887|A0A146R887_FUNHE) Integrin beta {ECO:0000256|RuleBase:RU000633} OX=8078 OS=Fundulus heteroclitus (Killifish) (Mummichog). GN= OC=Fundulus.
Sequence
MGSWSIRCLAGLGLLAVLLTYCSAQVHYCLASKSGSCSECLQAGEGCAYCSEETFSGPRC
DLHEKIVAQGCSAAAVITAKSSLLIEKEEKINKKIQKAQASPQEATMTFLPGETKEINVQ
VFAPTKGPLDLYILMDFSNSMKDDLDNLKKMGNELAVVVKTLSDDYTIGFGKFVDKVIEP
QTDMRPSKRKQPWPDSDSPFAFQNVIKLTSDVDSFIKELQKERISGNLDAPEGGFDAILQ
AAVCKNEIGWRTHSTHLLVFSTESAFHYEADGVNVLAGILPRNDELCHLDGEGKYTEATN
QDYPSIPTLVRLLGEHNIIPIFAVTNHSYTHYSKLKEYFPIAEVGLLQEDSSNILQVMED
AFQSIRSKMSIRAENRPKAFDAHFLHLNNKVAEYGAFNFQPGEVGEFKVKLKAQRMIEET
HVCNMNPDDTEGMIKVKPTTFGVGVNVKASILCPTCDCEKTGIPKAERCHGNGKLVCGKC
QCDDGWLGTFCNCSKTSDLNKDQCIGPNMTKPCSGRGDCQACGSCVCHNPEQFEGPYCQY
DKTQCPRFSGILCNDRGSCVMGRCACSEGWEGAACECSKSNDTCLDTKGNICGGRGECKC
GSCKCPDSEIEMTSTCEPNFQFQLGACEVTRSCVQCQAWKTGEKKNKEECDQCPFKIVMV
DKLKERKDVLDSCSFRDEDDDCSYQYTVETSKDITNNELLVEVLKDRECPPASLLWLLPL
LLFLLLLLALLLLCCWKYCACCKSCWQSCLALLPCCRRGRMVGFKEDEYLLRQSQLTSNH
LDTPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALIKPNPDEWIQFPISLRLNRLFSENL
YRLDSRDAEQLRKEVSENLNEVYKQIPKAEKVQKIEFRKQENAGKRDDYTIMDTVLSAPR
RAYPDIVKLTEKNVQSGNFGDLKVVPGYYTVATDREAAGAVEFQEDVKSVDVHVPLFVKD
DDDDKKQLLVEARDVPLGIAEIAKRFVNITIIKEHATSIFSFLQPKYTYSRQDGVANIPI
SREIIEDGRTQVTYSTQDLTAKNKKDYVAMQGDLSYGPGETQKLVPVRLLELSEKDGFIE
DKQVKQFAMDLSNPRQGAKLGRYPRTVVTITDLPEPSVMMFKNSTQNFSTFDPTYNIPVV
RSRNEDTPATVHWRTVKSQRLDLSGPLKFAPGETEKYIVIDPKAHPGPVQPETFQLELFD
PSANAAVGERKNTIINVRDEPRSPEFSQTQMKGYSNLKGSSSPLATSPGARLPPPGNLKA
KATGPRNIHLSWDPPSGNPLGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMR
VCAYNAMGEGQPTNMVPCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEV
IYTPIDDERKQAGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAQNSVGWGPYRDATIN
LASQPTRPMSIPIIPDVPIVDAEAGDEYDSYLMYSNDVLKSPTSSKTPSVSGDDYTLNGK
WDHNFLFPGGSSARNLSSSSSPMSTLSSNYKGAGGSFTTETHTTYMSGPGSPRRQDLIGG
GVHTTEVHMRKRSENRGYTDENIRDSIVMGDESSKFLDLNARLSPGVPDTPSRLVFSALG
PTALKVSWQEPHCEKDIQGYCVLYQLLNGGETKRINVTNPAENSVVIHDLLPNHSYLFKV
KAQSQEGWGPEREGVITIESAVDPKSPLSPIQGSPFTLSTPSAPGPLVFTALSPDSLQLT
WEKPRKPNGDILGYVVTCEQLHGGGGMRSFNVSGDDGETSLTVPNLTENVPYKFKVQART
TQGFGPEREGIITIESQDGGALSQYNSQSVTRREVFQMPTEVTTRTNVSHTMLNDPYFSD
GMMMTQVTETGGMVSRQVTREVVQRGVVGSTVTKRMFYES
Download sequence
Identical sequences A0A146R887

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]