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Domain assignment for A0A1A6HWD2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1A6HWD2
Domain Number 1 Region: 291-492
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 5.72e-59
Family DNA polymerase beta-like 0.0000144
Further Details:      
 
Domain Number 2 Region: 136-228
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 1.7e-28
Family DNA polymerase beta, N-terminal domain-like 0.00023
Further Details:      
 
Domain Number 3 Region: 231-287
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 3.43e-18
Family DNA polymerase beta-like, second domain 0.00037
Further Details:      
 
Domain Number 4 Region: 33-123
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000243
Family DNA topoisomerase II binding protein 1, TopBP1 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1A6HWD2
Sequence length 493
Comment (tr|A0A1A6HWD2|A0A1A6HWD2_NEOLE) DNA-directed DNA/RNA polymerase mu {ECO:0000256|PIRNR:PIRNR000817} KW=Complete proteome; Reference proteome OX=56216 OS=Neotoma lepida (Desert woodrat). GN=A6R68_23458 OC=Muroidea; Cricetidae; Neotominae; Neotoma.
Sequence
MLPKRRRVRAESPHRAGASSAPLPVRFPGMAIYLAEPRMGRSRRAFLTRLARSKGFRILD
TYSSEVTHVVMEQTSAEEAICWQKNMDALLPDCPQPVLLDISWFTESMAAGQPVPEEVRH
HLEVPEPRKEPPSSVTIPTYACQRPTPLTHHNTTLSEALETLAEAAGLEGNEGRFLSFSR
AASVLKSLPCPVTSLSQLQGLPHFGEHSSRVIQELLEHGTCEEVEQVRCSERHQTMKLFT
QVFGVGVKTANRWYQEGLRTLDELREQPQRLTQQQKAGLQYYQDLSTPVGRADAEALRQL
VEATVRQTLPGATVTLTGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVISQLQNQGLVL
YHQYHRSHLDSAHLLRQNYTMXAFERSFCILCLPQPPHAALVGGLHPHPTWRAVRVDLVV
TPNSQFPFALLGWTGSQLFERELRRFSRQEKGLWLNSHGLFDPERKTFFHATSEEDIFRL
LGLKYLPPEQRNA
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Identical sequences A0A1A6HWD2

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