SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1D3K9L0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  A0A1D3K9L0
Domain Number - Region: 212-256
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 0.034
Family DNA polymerase beta-like, second domain 0.071
Further Details:      
 
Domain Number - Region: 139-188
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.0392
Family Apolipoprotein A-I 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1D3K9L0
Sequence length 344
Comment (tr|A0A1D3K9L0|A0A1D3K9L0_9PSED) Putative transposase, TnpA1 {ECO:0000313|EMBL:SBW84952.1} OX=1295141 OS=Pseudomonas veronii 1YdBTEX2. GN=PVE_R2G0927 OC=Pseudomonadaceae; Pseudomonas.
Sequence
MSVITVGIDLAKTVFAVHGVNEAGKAILVKPKVARDQLVPLIAQLPPCLIGMEACSGAHH
WARVFVQHGHTVRLMAPKLVAPYRMSGKRGKNDAADAAAICEAVTRPSMRFVPVKDEHQQ
ATLCLHRTRQGFIEERTATYNRLRGLLSEFGVVLPQSPERLRREIGPYLDSLPGWAKRCM
SELLEHTSHIEDRLVELDRAISQIAREDDRSRRLLQLRGVGSTTASALVASIGDGHDFRN
GRQVAAWLGLTPGQYSSGGKQRLGSITKAGDAYLRSLLVLGARSVMANLGDKQDTFSRWI
RNLIERRGYWRAAVAIAAKNARMAWAVLHYGDTFKLEQVEPTGA
Download sequence
Identical sequences A0A1D3K9L0 Q9K2X6
WP_043095457.1.73541

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]