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Domain assignment for A0A1J3GJZ6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1J3GJZ6
Domain Number 1 Region: 1502-1788
Classification Level Classification E-value
Superfamily BEACH domain 2.62e-122
Family BEACH domain 0.0000000156
Further Details:      
 
Domain Number 2 Region: 1898-2164
Classification Level Classification E-value
Superfamily WD40 repeat-like 4.43e-41
Family WD40-repeat 0.0027
Further Details:      
 
Domain Number 3 Region: 4-192
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.44e-23
Family Clostridium neurotoxins, the second last domain 0.042
Further Details:      
 
Domain Number 4 Region: 1327-1379,1422-1473
Classification Level Classification E-value
Superfamily PH domain-like 6.76e-17
Family PreBEACH PH-like domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1J3GJZ6
Sequence length 2167
Comment (tr|A0A1J3GJZ6|A0A1J3GJZ6_NOCCA) BEACH domain-containing protein lvsC {ECO:0000313|EMBL:JAU56503.1} OX=107243 OS=Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens). GN=LE_TR14678_c0_g1_i1_g.46393 OC=Coluteocarpeae; Noccaea.
Sequence
MRKDQQAFFDMNGVDSGIVIRTPVQWPVNKGFSFCCWLRVESFHGDRKMGIFSFMSKNGK
GCFAAIGNDGLSYVSLNLKRQCVNVHANLVSKKWHFICVSHSIGRAFWGGSLLRCYVDGE
LVSSERCSYPKVTDVLTSCFIGTSITLPHIQDNEGLESIRDVYPFFGQIGPIYLFNDSLS
TEQVQAIYSLGPSYMYAFLENEMTGPFSDNAFPSGILDGKDGLASKVSFGLNAQASDGRR
LFNVSRVSDHLQDRIAFEAGIMVGTQLCSRRLLQQIIYCVGGISVFFPLITVSDRCESEA
LKEETSAMPAAKERMTAEVIELIASVLDENPGNQQQMHLLSGFPILGFLLQSIQPKQLNL
KTLASLKHLFSVISSSGFAEQLVEDAISNIFLNPHIWLHVAYNVQRELYMFLIQQLDNDP
RLLGSLCRLPRVIDIVWNFYWESERYRPAKGSKPLMHPARTIEERPSKDEIHKIRLLLLS
LGEMSLRQNITSGDVKALASFFETCQDVACIEDVLHMVIRVISQTSVLALFLEQVNLIGG
CHIFVNLLQRDYEPIRLLGLQFLGRLLYDVPSEKKGPRFFNLAVGRAKSLSQGHKKISGR
APPIFFAMSDRLFQYPQTDNLRATLFDVLLGGASPKQVLQQYNQVDKQRNKASNSHFFLP
QIFVFIFTLLSGCKDGSARIKIISDILDLLDSNPMNVEALMEFGWSAWLSASVKLDVIKD
YRSELLNHDDLALNEQHFVRGLFCVVLCHYILSVKGGWQQLEETVNFILLQSEDNDAPYR
SFLRDLYEDLIQRLVELSSEDNIFLLHPCRDNVLYLLRLVDEMLVREFGSRLLFPANGTD
FSEDLVQLENREDHSSGLDESFQRLLTEETSRNTESQQSCTRVIALTTNERWWNLYDNLW
RIICDINGRGPAKMSPKSSAAGPSIGQRARGLVESLNVPAAEMAAVVVSGGIGSALSGKI
NKNVDKAMLLRGEKCPRIVFRLVTLYLCMSSLEKATRCVQQVTSLLPSFLAAEDEQSKSR
LHLFIGCLLYVRSQYGMLDDGARFHVISHLIRETVSCGKSILATSGMSKDDSSDSGGIFK
EMGSIQNLIQKDRVLAAVTDETTYMKTLVSDRTRQVQALGERNNETLSLECNSKKAFDDE
LQSVLKAVLTWDENRRVAVQLSHEEQQQNVTEKWIHMLRSLMDERGPWSATPFPNNILHH
WKLDRTEDSWRRRPKLRRNYHFDERLCHPPSTSTTAENETSNVINESKSGVIHLPEQMKR
FLLKGIRRITDEGGSESCENESSQSDQNFMDTSADIQFSELVRSSGEMKDVVQDKVDASS
LEVDTSEVLTSVPCVLITPKRKLAGWLAVLKNVLHFSGEFLVEGTGGSSVFKNFSTPKGS
DVTKPDNKQNNVKWSSPHESETFLDLESERNNQKPVIEVKRHRRWKIGKVKGVHWTRYLL
QYTALEIFFQESVPPIFLNFASPKNAKEVGMLIVSTRNEFLFPKNVARDRTAVISFVDKR
VAIEMAETARDRWRRREITNFEYLMILNTLSGRSYNDLTQYPVFPWVVADYSSETLDFSK
ASTFRDLSKPVGALDSRRFEIYEDRYHSFSDPDIPSFYYGSHYSSMGSVLYYLLRLEPFT
SLHRSLQGGKFDHADRLFQSIEGTYRNCLSNTSDVKELIPEFFYMPEFLVNSNSYHLGVK
QDGEPLGDICLPPWAKGSPEMFIARNREALESEYVSSHLHDWIDLIFGHKQRGKPAVEAA
NIFYYLTYEGAVDIENMEDELQISAIEDQIANFGQTPIQIFRKKHPRRGPPIPIAHPLYF
APASINLTSILPATTNPPSAVLYVGIVDSNIVLVNQGLTLSVKIWLTTQLHSGGNFTFSS
SQDPFFGVGSDVLSPRNIGSPLADNVELGSQCFAAIQTPLENFLVSCGNWENSFHVISLT
DGRVVQSIRHHKDVVSCVAVTADSSILATGSYDTTVMVWDILRMKTPDKRVRNTHAEPLR
KDIVLPDAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCIFHTLREGRYIRSLKHPSR
SAVSKLAASHHGRIVLYGDDDLSLHLYSINGKHLASSESNGRINCLELSKCGEFLVSAGD
QGQIVVRSMNTLEVVRRYNGAAGKIITSLTVTQEECFLAGTKDGALLVYSIENPQHRKTS
PIWSIKS
Download sequence
Identical sequences A0A1J3GJZ6

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