SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1S3GBV9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1S3GBV9
Domain Number 1 Region: 9-70
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 2.88e-25
Family KRAB domain (Kruppel-associated box) 0.00098
Further Details:      
 
Domain Number 2 Region: 486-543
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.39e-24
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 3 Region: 433-487
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.3e-24
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 4 Region: 374-429
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.19e-22
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 5 Region: 207-264
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.44e-22
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 6 Region: 528-580
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.07e-21
Family Classic zinc finger, C2H2 0.0061
Further Details:      
 
Domain Number 7 Region: 336-388
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.42e-19
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 8 Region: 249-297
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.65e-18
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 9 Region: 153-208
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000979
Family Classic zinc finger, C2H2 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1S3GBV9
Sequence length 589
Comment (tr|A0A1S3GBV9|A0A1S3GBV9_DIPOR) zinc finger protein 354A {ECO:0000313|RefSeq:XP_012886317.1, ECO:0000313|RefSeq:XP_012886318.1} KW=Complete proteome; Reference proteome OX=10020 OS=Dipodomys ordii (Ord's kangaroo rat). GN=Znf354a OC=Heteromyidae; Dipodomyinae; Dipodomys.
Sequence
MAPEPSEAKSQVSVTFEDVAVLFTRDEWRKLDPSQRSLYREVMLENYSNLASLGFPFTKP
KVISVLQQGEDPWKVGKEGAGNTTLGWKHSHKTTKSTQTPESSFQGLIMKRSKRNGPRNL
KLEKHCIYEDKSEKKKGENTGKGHKNNEFSQKFSPKSLLVRQQIVPREEAPPKCERQANT
FKQNSDLLNPPKLTAEKRYQCSICEKTFINTSSLRKHEKNHSGEKLFKCKECSKAFNQSS
ALIQHQITHTGEKPYICKECGKAFTLSTSLYKHLRTHTVEKSYRCKECGKAFGRRSGLFI
HQKIHAGENPCRYNPGRKASSCNTSFPGQRIHSRKKSYLCNECGNTFKSSSSLRYHQRIH
TGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCTECGKGFTSISRLNRHRIIHTGEK
FYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKC
NECGKTFRCNSSLSNHQRIHTGEKPYRCEECGMSFGQSSALIQHRRIHTGEKPFKCNTCG
KTFRQSSSRIAHQRIHTGEKPYECNTCGKLFNHRSSLTNHYKTHVEEDS
Download sequence
Identical sequences A0A1S3GBV9
XP_012886317.1.60039 XP_012886318.1.60039

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]