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Domain assignment for A0A1U7R541 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1U7R541
Domain Number 1 Region: 3-138
Classification Level Classification E-value
Superfamily Eukaryotic RPB5 N-terminal domain 2.62e-42
Family Eukaryotic RPB5 N-terminal domain 0.00033
Further Details:      
 
Domain Number 2 Region: 135-209
Classification Level Classification E-value
Superfamily RPB5-like RNA polymerase subunit 2.49e-30
Family RPB5 0.0000881
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A1U7R541
Sequence length 210
Comment (tr|A0A1U7R541|A0A1U7R541_ALLSI) DNA-directed RNA polymerases I, II, and III subunit RPABC1 {ECO:0000313|RefSeq:XP_006017506.1} KW=Complete proteome; Reference proteome OX=38654 OS=Alligator sinensis (Chinese alligator). GN=POLR2E OC=Alligator.
Sequence
MDDEEETYRLWKIRKTIMQLCHHRCYLVTQDELDQTLDEFKGQYGDKPSEGRPRRADLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKLYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
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Identical sequences A0A1U7R541
XP_006017506.1.24877

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