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Domain assignment for A0A1U9WSH0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1U9WSH0
Domain Number 1 Region: 2781-3084
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.39e-119
Family Viral cysteine protease of trypsin fold 0.000000579
Further Details:      
 
Domain Number 2 Region: 5992-6170
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 2.74e-63
Family Nsp15 N-terminal domain-like 0.0000417
Further Details:      
 
Domain Number 3 Region: 3506-3664
Classification Level Classification E-value
Superfamily Coronavirus NSP8-like 8.24e-59
Family Coronavirus NSP8-like 0.0000184
Further Details:      
 
Domain Number 4 Region: 3797-3917
Classification Level Classification E-value
Superfamily Coronavirus NSP10-like 1.57e-50
Family Coronavirus NSP10-like 0.0000079
Further Details:      
 
Domain Number 5 Region: 6170-6323
Classification Level Classification E-value
Superfamily EndoU-like 3.73e-50
Family Nsp15 C-terminal domain-like 0.0000986
Further Details:      
 
Domain Number 6 Region: 4344-4647,4688-4833
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 7.91e-48
Family RNA-dependent RNA-polymerase 0.019
Further Details:      
 
Domain Number 7 Region: 3677-3785
Classification Level Classification E-value
Superfamily Replicase NSP9 4.58e-40
Family Replicase NSP9 0.00021
Further Details:      
 
Domain Number 8 Region: 3382-3464
Classification Level Classification E-value
Superfamily Coronavirus NSP7-like 6.41e-30
Family Coronavirus NSP7-like 0.00031
Further Details:      
 
Domain Number 9 Region: 5146-5457
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.35e-29
Family Tandem AAA-ATPase domain 0.036
Further Details:      
 
Domain Number 10 Region: 1015-1175
Classification Level Classification E-value
Superfamily Macro domain-like 1.28e-28
Family Macro domain 0.00086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1U9WSH0
Sequence length 6631
Comment (tr|A0A1U9WSH0|A0A1U9WSH0_9GAMC) ORF1ab {ECO:0000313|EMBL:AQY55802.1} OX=11120 OS=Infectious bronchitis virus. GN=orf1ab OC=Nidovirales; Coronaviridae; Coronavirinae; Gammacoronavirus.
Sequence
MASSLKQGASSQNQRSVILVAKDIPDQLCDALFFYTSHDPKDYADAFAFRQKFDRSLGAG
KQFKFETVCGPFFLKGVDKITPGVPAKVIKATSKLADLEDIFGVSPLARKYRELLKTACQ
WSLTVEALDARAQTLEEIFEPTEIFWLQVAAKIQVSAMAMRRLVGEVTAKVMDSLGSNLS
ALFQVVKETMARIFQKALAIFGSVSELPQRIAALKMAFAKCARSITVVVVEHALTIREFA
GTCLASINGAVAKFFEELPTGFMGAKVFSTLAFFKEAAVKIVENIPNAPRGTKGFEVVGN
AKGTQVVVRGMRNDLTLLDQKAEVPMEPEGWSAILEGHLCYVFKSGDRFYAAPLSGNFAL
HDVHCCERVVCLSDGVTPEINDGLVLAAIYSSFSVSELVAALKKGEPFKFLGHKFVYAKE
AAVSFTLAKAATIGDVLKLFQSARVKTEDVWSALTEQSFEFWKLAYNRVRNLEEVLKTHF
CKAQMSVVILAVVLGEGIWHLCSQVIYKLSGLFSKVVDFCEKHWKGFCTQLRKVRLVVTE
NLCVLKGIAQHCFQLLLEAIHSMYKSFKKCALGRISGDLFFWKGGVHKIIHDGDEIWFDA
VDTIEVEDLGTIQEKLIDFEVCEDVILPENQPGHMVQIQDDGKNYMFFRFKKDENIYYTP
MSQLGAINVICKAGGKTVTFGETTVKEIPPPDVVPIKVSIECCGEPWNTIFKKAYKEPIE
VETDLTVEQLLTVIYDKMCEDLKLFPEAPEPPPFENVVLVDKNGKDLDCIKSCHLIYRDY
ESDDDIEEEDAEECDTDPADAEECDTASECEEEDEDTKVLSLLQDPASNKYPLPLDDDYS
VYNGCIVHKDALDVVNLPSGEETFVVNNCFEGAVKPLPRKVVDVLGDWGEAVDAQEQLCE
QESESVKESVEKPTGVGGSAIEEAVVVGQEVVPVVEESQEVVVFTPADLEVAKETSEDVD
EFVLVADVPIEKVVPQEKEEPQVEQEPIQVVKPQREKKAKKFKVRQTTCEKPKFLEYTTC
VGDLTVVIAKALDEFKEFCVVNAANEHMSHGGGVAKAIADFCGPDFVEYCEDYVKKHGPQ
QRLVTPSYVKGIQCVNNVVGPRHGDKALEEKLVAAYKNVLVDGVVNYVVPVLSSGIFGVD
FKTSIDAMRKAFEGLNIRVLLFSLSQEHIDYFDATCKQKKIYLTEDGVKYRSVVVKPGDS
LGQFGQVFAKNKTVFTADDVEDEEVLFTPTTDKAVLEYYGLDAQKYVIYLQTLAQKWEVQ
YRDDFILLKWRDGNCWISSAIVLLQAAKIRFRGFLAEAWAKFLGGDPTDFVAWCYASCNA
KVGDFSDCNWLLANLAEYFDADYTNALLKKRVSCNCGVKSYELRGLEACIQPVRAPNLLH
FKTQYSNCPTCGANSMDEVVEASLPYLLLVATDGPAAVDCDENAAGNVVFIGSTNSGHCY
TQAVGKAFDNLAQDRKFGKRSPYITAMYMRFSLKSQNSLSVAKKSKSKSEVVKEDVSNLA
TSSKFSFDDLTDFEQWYDSNIYESLKVQETPESMGEYVSFTTKEDSKLPLTLKVRGIKSD
VDFKSKDGFTYKLTPDTDENSNAPVYYSVLDSVSLKAIWVEGSANFVVGHPNYNSRALRI
PTFWECAESFVKIGEKVDGVTMGLWRAEHHNRPNLERIFNVVKKTMVGTSVVTTQCGKLI
SKAATFVADKVGDGVIRNVTDRIKGCFGFTREHFERRMSPQFLKTIFFFFFCLLKAGAKS
LVASYRTVLCKVLFTALLIFWVVYTSNPVMFTGIRVLDFLFEGSFCSPYADYGKESFDIL
RYCGSDFICRVCLHGKDSLHLYKHAYSVEQFYKDAVNGVSFTWNWLYMLFLILFVKPVAG
FVIICYCIRYLVLSTTVLQTGVGFLDWFIQTVFANFNFMGAGFYFWLFYKIYIQVHHIMY
CKDITCEVCKKVARSNRHEVSVVVNGRKQLVHVYTNSGYTFCKKHNWYCKNCDKYGHQNT
FMSPEVAGELSEKLKRHIKPTAHAYHVVDDACLVDDFVNLKYNAAIPGKEGVHSAVKCFS
VSDFLKKAVFLKDAQKCEQISNDSFIVCNTHSAHALEEAKNAAIYYAQCLCKPILILDQA
LYEQLIVEPVSKSVVDKVCNILSNIISVDSAALNYKAGTLRDALLSVTKDEEAVDMAIFC
HNNDVEYTNDGFTNVVPSYGIDTDKLTPRDRGFLINADAAIANLKVKNSPPVVWKYSDLI
KLSDSCLKYLISATVKSGGRFFITRSGAKQVIACYTQKLLVEKNAGGVVSSTVSWFKSCC
KRLLVFYLLFTVCCLGYYQWEMSREFAPPMYDFNATMHVEGFKVIDKGVLRDIVPEDTCF
SNKYVNFDSFWGKPYVNSRDCPIVTAIIDGAGTVAAGVPGFVQWVMDGVMFIHMTQTERR
PWYIPTWFNREIVGYTHDSIITEGEFYTSIALFAARCLYLTFSNTPQLYCFNGDNDAPGA
LSFASILPHRAYFQPNGVRLIVPQQIMHTPYIVKLVSDSYCRGSVCEVTKPGYCVSMNSQ
WVLFNDEYTIKSGVFCGSTVRELLFNMVSTFFTGVNPNIYMQLAIMFLILVAVVLVFAMV
IKFQGVFKAYATTVFTIMLVWLINAFVLCVHSYNSVLAIILLVIYCYASLVTSRNTAIIM
HCWLVFTFGLIVPSWIACVYLGFVLYMYTPLFLWCYGTTKNCRKLYEGNEFVGNYDLAAK
STFVIRGPEFVKLTNEIGDKFDAYLSAYARLKYYSGTGSEQDYLQACRAWLAYALDQFRS
SGVEVVYTPPRYSIGVSRLQAGFKKLVSPSSAVEKCIVSVSYRGNNLNGLWLGDSIYCPR
HVLGKFSGDQWGDVLNLANNYEFEVVTGNGVTLSVVSRRLKGAVLILQTAIVNAETPKYK
FMKANCGDSFTIACSYGGTVIGLYSVTMRSNGTIRASFLAGACGSVGFNIEKGVVNFYYM
HHLELPNALHTGTDLMGEFYGGYIDEEVAQKVQPDKLVTNNILAWLYAAIISVKESSFST
PKWLESTTVSIEDYNKWAVDNGFTSFVSCTAITKLSAITGVDVCKLLRTIMVKSTQWGSD
PILGQYNFEDEMTPESVFNQVGGVRLQSSVVKKAASWFWSRCVLACFLFVLCSIVLFTAL
PYRYYLHGAAVLFAAVFFISFTVKHVMAFMDTFLLPTLITVIIGVCAEVPFIYNTLISQI
VIFFSQWYDPVVFDTVVPWMFLPLVLYTAFKCIQGCYSVNSFNTSLLVLYQFMKLGFVIY
TSSNTLIAYSEGNWELFFELVHTTVLANVSSNSLIGLIVFKFAKWMLYYCNASYLNNYVL
MAVIVNGIGWVFTCYFGFYWWINKVFGLTLGKYSFKVSVDQYRYMCLHKINPPKTVWEVF
STNILIQGIGGDRVLPIATVQSKLSDVKCTTVVLMQLLTKLNVEANSKMHAYLVELHNKI
LASDDVNECMDNLLGMLVTLFCVDSTIDLSEYCDDILKRSTVLQSVTQEFSHIPSYAEYE
RAKDLYEKVLAESKNGSVTQQELAAYRKAANIAKSIFDRDLAVQKKLDSMAERAMTTMYK
EARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVPLATVPIVCSNKLTLVV
PDPETWLKCVEGMHVTYSTVVWNIDNVIDADGTELQPISTGNGLIYCISGDNIAWPLKVN
LTRNVHNKVDAVLQNNELMPHGVKTKACVAGVDQAHCSVESKCYYTNISGNSVVAAITSS
NPNLKVASFLNEAGNQIYVDLDPPCKFGMKVGGKVEVVYLYFIKNTRSIVRGMVLGAISN
VVVLQSKGYETEEVDAVGILSLCSFAVDPADTYIKYVAAGNQPLGNCVKMLTVHNGSGFA
ITSKPSPTPDQDSYGGASVCLYCRAHIAHPGSAGNLDGRCQFKGSFVQIPTTEKDPVGFC
LRNKVCTVCQCWIGHGCQCDSLRQPKPSVQSDAGVPGFDKNYLNRVRGSSEARLIPLANG
CEPDVVERAFDVCNKESAGMFKNLKRNCARFQEVCGTEDGNLEYRDSYFVVKQTTPSNYE
HEKACYEDLKSEVTADHDFFVFNKNIYNISRQRLTKYTMMDFCYALRHFDPKDCEVLKEI
LVTYGCIEDYHPKWFEENKDWYDPIENPKYYAMLAKMGPIVRRALLNAVEFGNLMVEKGY
VGVVTLDNQDLNGKFYDFGDFQKTAPGAGVPVFDTYYSYMMPIIAMTDALAPERYFEYDV
HKGYKSYDLLKYDYTEEKQELFQKYFKYWDQEYHPNCRDCVDDRCLIHCANFNVIFSTLI
PQISFGNLCRKVFVDGVPFIATCGYHSKELGVIMNQDNTMSFSKMGLSQLMKFVGDPALL
VGTSNNLVDLRTSCFSVCALASGITHQTVKPGHFNKDFYDFAEKAGMFKEGSSIPLKHFF
YPQTGNAAINDYDYYRYNRPTMFDIRQLLFCLEVTSKYFECYEGGCIPASQVVVTNLDKS
AGFPFNKFGKARLYYEMSLEEQDQLFESTKKNVLPTITQMNLKYAISAKNRARTVAGVSI
LSTMTNRQFHQKVLKSIVNTRNAPVVIGTTKFYGGWDNMLRNLVQGVEGPMLMGWDYPKC
DRAMPNLLRIAASLVLARKHTNCCTWSERIYRLYNECAQVLSETVLATGGIYVKPGGTSS
GDATTAYANSVFNIIQATSANVARLLSVITRDIVYDDIKSLQYELYQQVYRRVNFDPSFV
EKFYSYMCKNFSLMILSDDGVVCYNNTLAKQGLVADISGFREILYYQNNVYMADSKCWVE
PDLEKGPHEFCSQHTMLVEVDGEPRYLPYPDPSRILGACVFVDEVDKTEPVAVMERYIAL
AIDAYPLVHHENEEYKKVFFVLLSYIRKLYQELSQSMLIDYSFVMDIDKGSKFWEQEFYE
NMYRAPTTLQSCGVCVVCNSQTILRCGNCIRKPFLCCKCCYDHVMHTDHKNVLSINPYIC
SQPGCGEADVTKLYLGGMSYFCGNHKPKLSIPLVSNGTVFGIYRANCVGSENVDDFNQLA
TTNWSTVEPYILANRCSDSLRRFAAETVKATEELHKQQFASAEVREVISDRELILSWEPG
KTRPPLNRNYVFTGYHFTRTSKVQLGDFTFEKGEGRDVVYYRATSTAKLSPGDIFVLTSH
NVVSLVAPTLCPQQTFSRFVNLRPNVMVPECFVNNIPLYHLVGKQKRTTVQGPPGSGKSH
FAIGLAAYFSNARVVFTACSHAAVDALCEKAFKFLKVDDCTRIVPQRTTVDCFSKFKAND
TGKKYIFSTINALPEVSCDILLVDEVSMLTNYELSFINGKINYQYVVYVGDPAQLPAPRT
LLNGSLSPKDYNVITNLMVCVKPDIFLAKCYRCPKEIVDTVSTLVYDGKFVANNPESREC
FKVVVNNGNSDVGHESGSAYNTTQLEFVKNFVCRNKQWREATFISPYNAMNQRAYRMLGL
NVQTVDSSQGSEYDYVIFCVTADSQHALNINRFNVALTRAKRGILVVMRQRDELYSALKF
TELDSEAILQGTGLFKICNKEFSGVHPAYAVTTKALAATYKVNDELAALVNVEAGSEITY
KHLISLLGFKMSVNVEGCHNMFITRDEAIRNVRGWVGFDVEATHACGTNIGTNLPFQVGF
STGADFVVTPEGLIDTSIGNNFEPVNSKAPPGEQFNHLRALFKSAKPWHVIRPRIVQMLA
DNLCNVSDCVVFVTWCHGLELTTLRYFVKIGKEQVCSCGSRATTFNSHTQAYACWRHCLG
FDFVYNPLLVDIQQWGYSGNLQFNHDLHCNVHGHAHVASADAIMTRCLAINNAFCKDVNW
ELQYPHIANEDEVNSSCRYLQRMYLNACVDALKVNVVYDIGNPKGIKCVRRGDVNFRFYD
KNPIVPNVKQFEYDYSQHKDKFADGLCMFWNCNVDCYPENSLVCRYDTRNLSVFNLPGCN
GGSLYVNKHAFHTPKFDRISFRNLKAMPFFFYDSSPCETIQVDGVAQDLVSLATKDCITK
CNIGGAVCKKHAQMYAEFVASYNAAVTAGFTFWVTNNFNPYNLWKNFSALQSIDNIAYNM
YKGGHYDAIAGEIPTVITGDKVFVIDQGIEKAVFVNQTTLPTSVAFELYAKRNIRTLPNN
RILSGLGVDVTYGFVIWDYANQTPLYRNTVKVCAYTDIEPTGLIVLYDDRYGDYQAFLAA
DNAVLVSTQCYKRYSYVEIPSHLLVQNGMPLKDGANLYVYKRVNGAFVTLPNTLNTQGRN
YEAFEPRSDVERDFLDMSEEDFIEKYGKDLGLQHILYGEVEKPQLGGLHTVIGMYRLLRA
NKLDAKSVTNSDSDVMQNYFVLADNGSYKQVCTVVDLLLDDFLELLRNILKEYGTNKSKV
VTVSIDYHSVNFMAWFEEGSIKTCYPQLQSAWTCGYNMPELYKVQNCVMEPCNIPNYGVG
ITLPSGIMMNVAKYTQLCQYLSKTTMCVPHNMRVMHFGAGSDKGVAPGSTVLKQWLPEGT
LLVDNDIVDYVSDAHVSLLSDCNKYKTEHKFDLVISDMYTDNDSKKKHEGIVANNGNDDV
FIYLANFLKNNLALGGSFAIKVTETSWHESLYDIAQDCAWWTMFCTAVNASSSEAFLLGI
NYLGASDNVKVSGKTLHANYIFWRNCNYLQTSAYSTFDVAKFGLKLKATPVVNLKTEQKT
DLVVNLLRNGKLLIRDVGEVTVFSDHFVCTM
Download sequence
Identical sequences A0A1U9WSH0

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