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Domain assignment for A0A2H4MWX9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A2H4MWX9
Domain Number 1 Region: 11-159
Classification Level Classification E-value
Superfamily Coronavirus RNA-binding domain 5.1e-34
Family Coronavirus RNA-binding domain 0.00026
Further Details:      
 
Domain Number 2 Region: 247-352
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 3.49e-25
Family Coronavirus nucleocapsid protein 0.00097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A2H4MWX9
Sequence length 399
Comment (tr|A0A2H4MWX9|A0A2H4MWX9_9NIDO) Nucleoprotein {ECO:0000256|PIRNR:PIRNR003888, ECO:0000256|SAAS:SAAS00869216} OX=2050018 OS=Rodent coronavirus. GN= OC=Nidovirales; Coronaviridae; Coronavirinae; unclassified coronaviruses.
Sequence
MSSNVSWADQVEAANRRQRSRSRGRSQNRTNASIPLSWFTSIIDESNGNFTSLMPPSGVP
TGLGTAAQQCGYWYRAPTVYQVRRGKRVPLPPVWYFYFLGTGPHANAAYGTAMDGVFWVK
TKNGQIDPKSIKALGVRDSGTDPRRANIPNLPEGLRVNVPNASRPQSRAQSQTRSQNNSR
ASSVNRNGSRAPSVDRTKEDLKAVVSQLLAEMGVSKTSKQTQNQNQNQSQSKKKQKGSTP
AVTPHPNQDGKPVWKKKPNKEETVAQCFGPRSDNKNFGDAEFLRLGVDDPRFKTVSYYAP
GAAASLFDSMVTVSDGPDGKKRVTFHTTIEVDPIKPGFEVFLAQIDAFKKPATFQQTQNF
WENQASTQNNISEYFRGTTPGAGGSAVEIETFEMTDETN
Download sequence
Identical sequences A0A2H4MWX9

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