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Domain assignment for A8R4D8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A8R4D8
Domain Number 1 Region: 54-193
Classification Level Classification E-value
Superfamily Coronavirus RNA-binding domain 1.12e-55
Family Coronavirus RNA-binding domain 0.0000443
Further Details:      
 
Domain Number 2 Region: 263-381
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 1.33e-30
Family Coronavirus nucleocapsid protein 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A8R4D8
Sequence length 446
Comment (tr|A8R4D8|A8R4D8_9BETC) Nucleoprotein {ECO:0000256|PIRNR:PIRNR003888, ECO:0000256|SAAS:SAAS00869216} KW=Complete proteome OX=136187 OS=Equine coronavirus. GN= OC=Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus.
Sequence
MSFTPGKQSSSRASSGNRAGNGILKWADQSDQSSNFQTRGRRAQPKQTATSQPAGGNVVP
YYSWFSGITQFQKGKEFQFAEGQGVPIAPGIPATEAKGYWYRHNRRSFKTADGNQRQLLP
RWYFYYLGTGPHAKAQYGTNIDGVFWVANKQADVNTPADVVDRDPSSDEAIPTRFPPGTV
LPQGYYIEGSGRSVPNSRSTSRASSRASSAGSRNRSNSGTRTPTSGVTSDMADQIASLVL
AKLGKDATKPQQVTKQTAKEVRQKILNKPRQKRSPNKQCTVQQCFGKRGPNQNFGGAEML
KLGTSDPQFPILAELAPTAGAFFFGSRLELAKVQNLSGNFDEPQKDVYELRYNGAIRFDS
TLPGFETIMKVLNENLNAYQQQDDGTNMSPKPQRQRGQQKGGENEDVSVAAPKSRVQQNK
SRELTAEDISLLKQMDDPLTEDNSEM
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Identical sequences A8R4D8
A8R4D8_9BETC gi|167600363|ref|YP_001672005.1|

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