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Domain assignment for B0LPY8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  B0LPY8
Domain Number 1 Region: 5-165
Classification Level Classification E-value
Superfamily Coronavirus RNA-binding domain 1.03e-55
Family Coronavirus RNA-binding domain 0.000000195
Further Details:      
 
Domain Number 2 Region: 218-325
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 1.11e-40
Family Coronavirus nucleocapsid protein 0.000000774
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B0LPY8
Sequence length 409
Comment (tr|B0LPY8|B0LPY8_9GAMC) Nucleoprotein {ECO:0000256|PIRNR:PIRNR003888, ECO:0000256|SAAS:SAAS00869216} OX=11120 OS=Infectious bronchitis virus. GN=N OC=Nidovirales; Coronaviridae; Coronavirinae; Gammacoronavirus.
Sequence
MASSKATGKTDAPAPVIKLGGPKPPKVGSSGNASWFQPIKAKKLNSPQPKFEGSGVPDNE
NLKQSQQHGYWRRQHRFKQGKGGRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKG
ADTKSRSNQGTRDPDKFDQYPLRFADGGPDGNFRWDFIPLNRGRSGRSTAASSAASSRAP
SRDGSRGRRSGAEDDLIARAAKIIQDQQKKGSRITKAKADEMAHRRYCKRTIPPGYKVDQ
VFGPRTKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRVTPKLQPDGLHLKF
EFTTVVSRDDPQFDNYVKICDQCVDGVGTRPKDDEPRPKSRSNSRPATRGNSPAPRQQRP
KREKKPKKQDDEVDKALTSDEERNNAQLEFDDEPKVINWGDSALGDNEL
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Identical sequences B0LPY8
B0LPY8_9GAMC

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