SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for B9RJJ8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  B9RJJ8
Domain Number 1 Region: 46-316
Classification Level Classification E-value
Superfamily Tropomyosin 0.0000615
Family Tropomyosin 0.0023
Further Details:      
 
Weak hits

Sequence:  B9RJJ8
Domain Number - Region: 391-478
Classification Level Classification E-value
Superfamily MukF C-terminal domain-like 0.0458
Family MukF C-terminal domain-like 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B9RJJ8
Sequence length 868
Comment (tr|B9RJJ8|B9RJJ8_RICCO) Ribosome-binding protein, putative {ECO:0000313|EMBL:EEF48500.1} KW=Complete proteome; Reference proteome OX=3988 OS=Ricinus communis (Castor bean). GN=RCOM_1035180 OC=Acalyphoideae; Acalypheae; Ricinus.
Sequence
MQKLGFPSLKSFDQYKSLTGSVPGSAKNLPLSSRPFPDSISHGSFTNLKLTAEKLIKEQA
SVKTDLEIANSKLKKSTEHITALEEKLQNAFNENAKLKVRQMEDEKLWKGLESKFCSTKT
LCDQLTETLQHLACQVQDAEKDKAFFEIKLSESSNAIDSLNQQLNNLSLKLGSAEGTVRT
REKELEDLKIEKEEKNKIYMEEQCRTANLIEEKDAMLKKFEATLAANRLDTESLNSKLDE
MHHELGIKEDNIKCLMTTQEKLEKEKSDLQFSSNNFADKLAMSLQEIKDLEGFVHILAAQ
MAELDKQNLVFNDKFDQLNSLCDTCFKLIQLERDLIAKHAQKKFNQLHDKFLCVASEKDA
LQLVNQELNDKIIELQKAQDSIREQLSEGCRLAADRIQKLESEAEMLLSKKNETEILVSK
LEETIDSLREHLSTSENKMQDLLSKVAELEMENKDIAEKLQIELRKKAEDLATWKNKSEK
HEKHVDSLEKQVTQLHSNLEEKEEHLLQYKNREKMLEDQITESQALLTAAESKLTEAKKQ
YDMMLESKQMELSKHLKEISQRNDQAINDIRKKYEVEKLEIVNMEKEKADRAAVELERKY
NQNLAECKEEMRQQLLCIQDEHAALVLRIQQEHDRKEMSLKAGHMEEIKRAQLQAENELR
EKTTQLRNEHEVQMKALRCQHEDESRRLQEELDLQKSKEDRQRALLQLQWKVMSDRPQED
QEVTSKKDYSVSSTKIRDPGGGIRSQHAPDFSLPGETQTPVSKILKRVDNANTGSVMSIP
KHHKKVTHREYEVETTNGRTVTKRRKTKSTVMFEDPRKHKKKNTPKSITPRSVAKGTKIR
GRSHPSNIGDLFSEGSLNPYADDPYAFD
Download sequence
Identical sequences B9RJJ8
XP_002513917.1.68434 29908.m006027

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]