SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for D0MR87 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  D0MR87
Domain Number 1 Region: 140-392
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.04e-67
Family Extended AAA-ATPase domain 0.00000248
Further Details:      
 
Weak hits

Sequence:  D0MR87
Domain Number - Region: 36-64
Classification Level Classification E-value
Superfamily RILP dimerisation region 0.00131
Family RILP dimerisation region 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) D0MR87
Sequence length 401
Comment (tr|D0MR87|D0MR87_PHYIT) 26S protease regulatory subunit 8 {ECO:0000313|EMBL:EEY58006.1} KW=Complete proteome; Reference proteome OX=403677 OS=Phytophthora infestans (strain T30-4) (Potato late blight fungus). GN=PITG_00613 OC=Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.
Sequence
MTADVAMTSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQ
LLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLH
KILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPK
GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPS
IIFMDEIDSIGSSRMEGGGGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAAL
LRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTSSGAECKAVCTE
AGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK
Download sequence
Identical sequences D0MR87
XP_002909192.1.21288 PITG_00613

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]