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Domain assignment for F4MIZ3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F4MIZ3
Domain Number 1 Region: 6-165
Classification Level Classification E-value
Superfamily Coronavirus RNA-binding domain 1.44e-55
Family Coronavirus RNA-binding domain 0.000000126
Further Details:      
 
Domain Number 2 Region: 218-325
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 2.83e-39
Family Coronavirus nucleocapsid protein 0.000000462
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F4MIZ3
Sequence length 409
Comment (tr|F4MIZ3|F4MIZ3_9GAMC) Nucleoprotein {ECO:0000256|PIRNR:PIRNR003888, ECO:0000256|SAAS:SAAS00869216} KW=Complete proteome OX=11120 OS=Infectious bronchitis virus. GN= OC=Nidovirales; Coronaviridae; Coronavirinae; Gammacoronavirus.
Sequence
MASGKAAGKTDAPAPVIKLGGPKPPKVGSSGNTSWFQAIKAKKLNTPPPKFEGSGVPDNE
NIKPSQQHGYWRRQARFKPGKGGRKPVPDAWYFYYTGTGPAADLNWGDTQDGIVWVAAKG
ADTKSRSNQGTRDPDKFDQYPLRFSDGGPDGNFRWDFIPLNRGRSGRSTAASSAASSRAP
SREGSRGRRSDSGDDLIARAAKIIQDQQKKGSRITKAKADEMAHRRYCKRTIPPNYRVDQ
VFGPRTKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRVTPKLQLDGLHLRF
EFTTVVPCDDPQFDNYVKICDQCVDGVGTRPKDDEPKPKSRSSSRPATRGNSPAPRQQRP
KKEKKLKKQDDEADKALTSDEERNNAQLEFDYEPKVINWGDAALGENEL
Download sequence
Identical sequences F4MIZ3

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