SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F5NSQ5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F5NSQ5
Domain Number 1 Region: 119-281
Classification Level Classification E-value
Superfamily MukF C-terminal domain-like 1.23e-77
Family MukF C-terminal domain-like 0.000000026
Further Details:      
 
Domain Number 2 Region: 8-118
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.13e-48
Family MukF N-terminal domain-like 0.00000141
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) F5NSQ5
Sequence length 440
Comment (tr|F5NSQ5|F5NSQ5_SHIFL) Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00944654} KW=Complete proteome OX=766147 OS=Shigella flexneri K-227. GN=SFK227_1151 OC=Enterobacteriaceae; Shigella.
Sequence
MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVS
DAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREF
STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE
QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT
MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR
LRQSVQTYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPEDLEYEEFNEIREQLAA
IIEEQLAVYKTRQVPLDLGLVVREYLSQYPCARHFDVARIVIDQAVRLGVAQADFTGLPA
KWQPINDYGAKVQAHVIDKY
Download sequence
Identical sequences F5NSQ5
WP_001288849.1.95801

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]