SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for H2MJW6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  H2MJW6
Domain Number 1 Region: 152-238
Classification Level Classification E-value
Superfamily G protein-binding domain 7.32e-25
Family Rabaptin-5 0.0002
Further Details:      
 
Domain Number 2 Region: 399-427
Classification Level Classification E-value
Superfamily G protein-binding domain 0.000000000126
Family Rabaptin-5 0.00085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) H2MJW6
Sequence length 427
Comment (tr|H2MJW6|H2MJW6_ORYLA) Rabaptin, RAB GTPase binding effector protein 1 {ECO:0000313|Ensembl:ENSORLP00000018967} KW=Complete proteome; Reference proteome OX=8090 OS=Oryzias latipes (Japanese rice fish) (Japanese killifish). GN=rabep1 OC=Oryziinae; Oryzias.
Sequence
HTNHSTHGSVHSLDTEVVAGSPSDPYKDNLRRVQSTDSLGSSLSSQQALGGHNHKAKSAS
NLDESDFGPLVSAEYGATDSSFGETTSVSSIKLTASHFLLTKDQEKAIKAMTPEQEETAS
LLSSISQAPDAAYLPPAGYRLVSDTEWNLLQQEVKKLQVMLRQANDHLDRTMMEKQNLED
SINMGNEENAAKVSALTQRVQESETLLCTLQQAFSEAKRKTQEQMVVLVKSREQVAEELS
RLQRDNESLQGKHRLHVELQQQEDFQMPNTVQELQGLVFQCREDMVALRTSADHMEEKLK
AEILFLKEQIQAEQCLKENLEETLQLEIEGCKEEIASFSSLKTEMERIKAEKEKLRSSLT
EKMETLERLGGLKVSLEQQVRELASAKSALESQVLDERDKAQRLQTELDVSEQVQKDFVK
LSQTLQV
Download sequence
Identical sequences H2MJW6
ENSORLP00000018967

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]