SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for N0ABN4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  N0ABN4
Domain Number 1 Region: 62-118
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 1.99e-29
Family Arterivirus nucleocapsid protein 0.0000376
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) N0ABN4
Sequence length 123
Comment (tr|N0ABN4|N0ABN4_PRRSV) N {ECO:0000313|EMBL:AGK45337.1} OX=28344 OS=Porcine reproductive and respiratory syndrome virus (PRRSV). GN=ORF7 OC=Nidovirales; Arteriviridae; unclassified Arteriviridae. OH=9823
Sequence
MPNNNGRQQRKKKGDGQPVNQLCQMLGKIIAQQNQSRGKGPGSRNKKRNPEKPHFPLATE
DDVRHHFTPGERQLCLSSIHTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTTP
PSA
Download sequence
Identical sequences N0ABN4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]