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Domain assignment for Q06XQ8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q06XQ8
Domain Number 1 Region: 10-141
Classification Level Classification E-value
Superfamily Coronavirus RNA-binding domain 1.02e-47
Family Coronavirus RNA-binding domain 0.00046
Further Details:      
 
Domain Number 2 Region: 226-333
Classification Level Classification E-value
Superfamily Nucleocapsid protein dimerization domain 1.87e-39
Family Coronavirus nucleocapsid protein 0.00065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q06XQ8
Sequence length 344
Comment (tr|Q06XQ8|Q06XQ8_CVHNL) Nucleoprotein {ECO:0000256|SAAS:SAAS00869216} OX=277944 OS=Human coronavirus NL63 (HCoV-NL63). GN=N OC=Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus. OH=9606
Sequence
ASVNWADDRAARKKFPPPSFYMPLLVSSDKAPYRVIPRNLVPIGKGNKDEQIGYWNVQER
WRMRRGQRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGAKTVNTSLGNRKRNQK
PLEPKFSIALPPELSVVEFEDRSNNSSRASSRSSTRNNSRDSSRSTSRQQSRTRSDSNQS
SSDLVAAVTLALKNLGFDNQSKSPSSSGTSTPKKPNKPLSQPRADKPSQLKKPRWKRVPT
REENVIQCFGPRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALFFDSEVSTDEVGDN
VQITYTYKMLVAKDNKNLPKFIEQISAFTKPSSIKEMQSQSSHV
Download sequence
Identical sequences Q06XQ0 Q06XQ1 Q06XQ2 Q06XQ4 Q06XQ6 Q06XQ7 Q06XQ8
Q06XQ0_CVHNL Q06XQ1_CVHNL Q06XQ2_CVHNL Q06XQ4_CVHNL Q06XQ6_CVHNL Q06XQ7_CVHNL Q06XQ8_CVHNL

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