SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for R9TDM7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  R9TDM7
Domain Number 1 Region: 2990-3289
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 2.16e-144
Family Viral cysteine protease of trypsin fold 0.00000000158
Further Details:      
 
Domain Number 2 Region: 6134-6324
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 4.73e-72
Family Nsp15 N-terminal domain-like 0.0000664
Further Details:      
 
Domain Number 3 Region: 3692-3845
Classification Level Classification E-value
Superfamily Coronavirus NSP8-like 2.22e-69
Family Coronavirus NSP8-like 0.0000123
Further Details:      
 
Domain Number 4 Region: 6315-6467
Classification Level Classification E-value
Superfamily EndoU-like 1.18e-62
Family Nsp15 C-terminal domain-like 0.0000154
Further Details:      
 
Domain Number 5 Region: 3963-4084
Classification Level Classification E-value
Superfamily Coronavirus NSP10-like 2.35e-55
Family Coronavirus NSP10-like 0.00000861
Further Details:      
 
Domain Number 6 Region: 4492-4796,4837-4980
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.29e-51
Family RNA-dependent RNA-polymerase 0.02
Further Details:      
 
Domain Number 7 Region: 3852-3957
Classification Level Classification E-value
Superfamily Replicase NSP9 1.96e-43
Family Replicase NSP9 0.00014
Further Details:      
 
Domain Number 8 Region: 3572-3654
Classification Level Classification E-value
Superfamily Coronavirus NSP7-like 1.44e-33
Family Coronavirus NSP7-like 0.00045
Further Details:      
 
Domain Number 9 Region: 1256-1475
Classification Level Classification E-value
Superfamily Macro domain-like 3.2e-30
Family Macro domain 0.0002
Further Details:      
 
Domain Number 10 Region: 5295-5600
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.22e-27
Family Nitrogenase iron protein-like 0.046
Further Details:      
 
Domain Number 11 Region: 2170-2294
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000000785
Family Pectate lyase-like 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) R9TDM7
Sequence length 6773
Comment (tr|R9TDM7|R9TDM7_9ALPC) Polyprotein {ECO:0000313|EMBL:AGN29319.1} KW=Complete proteome OX=28295 OS=Porcine epidemic diarrhea virus. GN= OC=Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus.
Sequence
MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGGNIVPVDQYMC
GADGKPVLQESEWEYTDFFADSEDGQLNIAGITYVKAWIVDRSDVSYASQNLTSIKSITY
CSTYEHTFPDGTAMKVARTPKIKKTVVLSEPLATIYREIGSPFVDNGSDARSIIKRPVFL
HAFVKCKCGSYHWTVGDWTSYVSTCCGFKCKPVLVASCSATPGSVVVTRAGAGTGVKYYN
NMFLCHVADIDGLAFWRILKVQSKDDLACSGKFLEHHEEGFTDPCYFLNDSSLATKLKFD
ILSGKFSDEVKQAIFAGHVVVGSALVDIVDDALGQPWFIRKLGDLASAAWEQLKAVVRGL
NLLSDEVVLFGKRLSCATLSIVNGVFEFLADVPEKLAVAVTVFVNFLNELFESACDCLKV
GGKTFNKVGSYVLFDNALVKLFKAKVRGPRQAGICEVRYTSLVIGSTTKVVSKRVENANV
NLVVVDEDVTLNTTGRTVVVDGLAFFESDGFYRHLADADVVIEHPVYKSACELKPVFDCD
PIPDFPMPVAASVAELCVQTDLLLKNYNTPYRTYSCVVRGDKCCITCTLHFTAPSYMEDA
ANFVDLCTKNIGTAGFHEFYITAHEQQDLQGFVTTCCTMSGFECFMPIIPECPAVLEEID
GGSIWRSFITGLNTMWDFCKHLKVSFGLDGIVVTVARKFKRLGALLAEMYNTYLSTVVEN
LVLAGVSFKYYATSVPKIVLGCCLHSVKSVLASVFQIPVQAGIEKFRVFLNCVHPVVPRV
IETSFVELEETTFKPPALNGSIAIVDGFAFYYDGTLYYPTDGNSVVPICFKKKGGGDVKF
SDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKD
HIEVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDSEGDEVDSSE
PEKVADVANSETEADDVESEVEEVAATLSFIKDTPSTVTKDPFAFDFVSYGGLKVLRQSH
NNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLT
KDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTG
IFCRDTTVISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTIC
VKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHG
GGIAKTIDVCTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELL
VKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINY
MDGLVDAIFKEVLVDTIPVQEDVQQVSQEPVLPNFEPFRIEGAHAFYECNPEGLNSLGAD
KLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMVSITMV
VLPSDGDANYDKNYARAVVKVSKLKGKLVLAVGDATLYSKLSHLSVLGFVSTPDDVERFY
ANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSAN
WDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSA
GLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHD
GCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHL
FLKGVSYTTFLDNGNGVVGHYTVFDHGTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVI
KDPVKKVELDATKLLDTMNYASERFFFFGDFMSRNLITVFLYILSILGLCFRAFRKGDVK
VLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTP
IGSPVCDDVVAGYANSSFDRNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNV
MPFFYLAFLAIFGGVYVKAITLYFIFQYLNTLGVFLGLQQSIWFLQLVPFDVFGDEIVVF
FIVTRVLMFLKHVFLGCDKVSCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKK
HNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGD
TFWKYNFDITDSKYTCKEALKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLV
DSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVA
EAHRYDVLLTDMSFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLV
RDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGAGLPSFSKVKKF
FWFLCLFIVAVFFALSFLDFSIQVSSDSDYDFKYIESGQLKTFDNPLSCVHNVFSNFEQW
HDAKFGFTPVNNPSCPIVVGVSDEARTVPGIPAGVYLAGKTLVFAINTIFGTSGLCFDAS
GVADKGACIFNSACTTLSGLGGTAVYCYKNGLVEGAKLYSELAPHSYYKMVDGNAVSLPE
IISRGFGIRTIRTKAMTYCRVGQCVQSAEGVCFGADRFFVYNAESGSDFVCGTGLFTLLM
NVISVFSMTVPVTVLSGQILFNCIIAFAAVAVCFLFTKFKRMFGDMSVGVFTVGACTLLN
NVSYIVTQNTLGMLGYVTLYFLCTKGVRYMWIWHLGFLISYILIAPWWVLMVYAFSAIFE
FMPNLFKLKVSTQLFEGDKFVGSFENAAAGTFVLDMHAYERLANSISTEKLRQYASTYNK
YKYYSGSASEADYRLACFAHLAKAMMDYASNHNDMLYTPPTVSYNSTLQAGLRKMAQPSG
VVEKCIDRVCYGNMALNGLWLGDTVMCPRHVIASSTTSTIDYDYALSVLRLHNFSISSGN
VFLGVVSATMRGALLQIKVNQNNVHTPKYTHRTVRPGESFNILACYDGAAAGVYGVNMRS
NYTIRGSFINGACGSPGYNINNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQ
VEGASSLFTENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSILA
AKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDESTTGEVIRQMYGVNLQGGYVSRACR
NVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLSSLLMFTLKHKTLFFQVFLI
PALIVTSCINLAFDVEVYNYLAEHFDYHVSLMGFNAQGLVNIFVCFVVTILHGTYTWRFF
NTTVSSVTYVVALLTAAYNYFYASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPT
FVAIFGDIKSVMFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGL
RAPTGTLDSLLLSAKLIGIGGERNIKISSVQSKLTDIKCSNVVLLGCLSSMNVSANSTEW
AYCVDLHNKINLCNDPEKAQEMLLALLAFFLSKNSAFGLDDLLESYFNDNSMLQSVASTY
VGLPSYVIYENARQQYEDAVNNGSPPQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQA
AAQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSVIPAVSAT
KLNIVTSDIDSYNRIQREGCVHYAGTIWNIIDIKDNDGKVVHVKEVTAQNAESLSWPLVL
GCERIVKLQNNEIIPGKLKQRSIKAEGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVV
KWEFDGGCNTIELEPPRKFLVDSPNGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQAGK
QTEQAINSSLLTLCAFAVDPAKTYIDAVKSGHKPVGNCVKMLANGSGNGQAVTSGVEAST
NQDSYGGASVCLYCRAHVEHPSMDGFCKLKGKYVQVPLGTVDPIRFVLENDVCKVCGCWL
ANGCTCDRSIMQSTDYGLFKRVRGSSAARLEPCNGTDTQHAYRAFDIYNKDVACLGKFLK
VNCVRLKNLDKHDAFYVVKRCTKSAMEHEQSIYSRLEKCGAVAEHDFFTWKDGRAIYGNV
CRKDLTEYTMMDLCYALRNFDENNCDVLKSILIKVGACEESYFNNKVWFDPVENEDIHRV
YALLGTIVARAMLKCVKFCDAMVEQGIVGVVTLDNQDLNGDFYDFGDFTCSIKGMGIPIC
TSYYSYMMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKAVLFNKYFKYWGLQ
YHPNCVDCSDEQCIVHCANFNTLFSTTIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGI
VWNNDLNLHSSRLSINELLQFCSDPALLIASSPALVDQRTVCFSVAALGTGMTNQTVKPG
HFNKEFYDFLLEQGFFSEGSELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVY
QIVQRYFDIYEGGCITAKEVVVTNLNKSAGYPLNKFGKAGLYYESLSYEEQDELYAYTKR
NILPTMTQLNLKYAISGKERARTVGGVSLLSTMTTRQYHQKHLKSIVNTRGASVVIGTTK
FYGGWDNMLKNLIDGVENPCLMGWDYPKCDRALPNMIRMISAMILGSKHTTCCSSTDRFF
RLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANVNKLLSVDSN
VCHNLEVKQLQRKLYECCYRSTIVDDQFVVEYYGYLRKHFSMVILSDDGVVCYNNDYASL
GYVADPNAFKAVLYYQNNVFMSASKCWIEPDINKGPHEFCSQHTMQIVDRDGTYYLPYPD
PSRILSAGVFVDDVVKTDAVVLLERYVSLAIDAYPLSKHENPEYKKVFYVLLDWVKHLYK
TLNAGVLESFSVTLLEDSTAKFWDESFYANMYEKSAVLQSAGLCVVCGSQTVLRCGDCLR
RPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAF
PLCSAGNVFGLYKNSATGSPDVEDFNRIATSGWTDVSDYRLANDVKDSLRLFAAETIKAK
EESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFE
KAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPE
AYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFAACSHAAVDSLCVK
ASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCT
NYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHK
CYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFL
AKNPRWSKAVFISPYNSQNYVASRVLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNR
FNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQANEGCGLFKDCSRGDDLLPPSHAN
TFMSLADNFKTDQDLAVQIGVNGPIKYEHVISFMGFRFDINIPNHHTLFCTRDFAMRNVR
GWLGFDVEGAHVVGSNVGTNVPLQLGFSNGVDFVVRPEGCVVTESGDYIKPVRARAPPGE
QFAHLLPLLKRGQPWDVVRKRIVQMCSDYLANLSDILIFVLWAGGLELTTMRYFVKIGPS
KSCDCGKVATCYNSALHTYCCFKHALGCDYLYNPYCIDIQQWGYKGSLSLNHHEHCNVHR
NEHVASGDAIMTRCLAIHDCFVKNVDWSITYPFIGNEAVINKIGRIVQSHTMRSVLKLYN
PKAIYDIGNPKGIRCAVTDAKWFCFDKNPTNSNVKTLEYDYITHGQFDGLCLFWNCNVDM
YPEFSVVCRFDTRCRSPLNLEGCNGGSLYVNNHAFHTPAFDKRAFAKLKPMPFFFYDDTE
CDKLHDSINYVPLRASNCITKCNVGGAVCSKHCAMYHSYVNAYNTFTSAGFTIWVPTSFD
TYNLWQTFSNNLQGLENIAFNVVKKGSFVGAEGELPVAVVNDKVLVRDGTVDTLVFTNKT
SLPTNVAFELYAKRKVGLTPPITILRNLGVVCTSKCVIWDYEAERPLTTFTKDVCKYTDF
EGDVCTLFDNSIVGSLERFSMTQNAVLMSLTAVKKLTGIKLTYGYLNGVPVNTHEDKPFT
WYIYTRKNGKFEDYPDGYFTQGRTTADFSPRSDMEKDFLSMDMGLFINKYGLEDYGFEHV
VYGDVSKTTLGGLHLLISQVRLACMGVLKIDEFVSSNDSTLKSCTVTYADNPSSKMVCTY
MDLLLDDFVSILKSLDLSVVSKVHEVMVDCKMWRWMLWCKDHKLQTFYPQLQASEWKCGY
SMPSIYKIQRMCLEPCNLYNYGAGVKLPDGIMFNVVKYTQLCQYLNSTTMCVPHHMRVLH
LGAGSDKGVAPGTAVLRRWLPLDAIIVDNDSVDYVSDADYSVTGDCSTLYLSDKFDLVIS
DMYDGKIKSCDGENVSKEGFFPYINGVITEKLALGGTVAIKVTEFSWNKKLYELIQKFEY
WTMFCTSVNTSSSEAFLIGVHYLGDFASGAVIDGNTMHANYIFWRNSTIMTMSYNSVLDL
SKFNCKHKATVVVNLKDSSISDVVLGLLKNGKLLVRNNDTICGFSNHLVNVNK
Download sequence
Identical sequences R9TDM7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]