SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for S3XXX2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  S3XXX2
Domain Number 1 Region: 92-305
Classification Level Classification E-value
Superfamily Transmembrane di-heme cytochromes 5.34e-38
Family Formate dehydrogenase N, cytochrome (gamma) subunit 0.00063
Further Details:      
 
Weak hits

Sequence:  S3XXX2
Domain Number - Region: 59-92
Classification Level Classification E-value
Superfamily Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 0.00536
Family Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) S3XXX2
Sequence length 320
Comment (tr|S3XXX2|S3XXX2_9PROT) Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EPH10233.1} KW=Complete proteome; Reference proteome OX=883165 OS=Campylobacter ureolyticus ACS-301-V-Sch3b. GN=HMPREF9309_00012 OC=Campylobacteraceae; Campylobacter.
Sequence
MRKIFILLCSFAGLFAYNEEFKKAIQDNSSVWGKARVENIDTYYNNPFAEWFVWLQSSGF
FANLALFAIIAVLVAFVGHYAIVGPKSFSHDHGKVYAFNVIERLTHAVAALSWVILVPTG
IIMMFGEEFGGGFFVRLCKNLHGIATILFAIVLPYMFFKWLFRMLPASYDARWAIMVGGY
LSKNKKPIPAGKFNLGQKAWFWVCMGGGFVMVITGALMYFLDTQIPVANGAFLGMTQIDI
LRLSAIIHNILGAACAVFLLVHIYMAVFCIKGSIHAIINGYKEEEEVYILHHYWYQELLR
KGKIKPSVFEKEYTNLKPVK
Download sequence
Identical sequences S3XXX2
WP_016645868.1.23151

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]