SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for W2CVI0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  W2CVI0
Domain Number 1 Region: 309-353
Classification Level Classification E-value
Superfamily LysM domain 0.0000129
Family LysM domain 0.0085
Further Details:      
 
Weak hits

Sequence:  W2CVI0
Domain Number - Region: 30-74
Classification Level Classification E-value
Superfamily Lysozyme-like 0.00259
Family G-type lysozyme 0.068
Further Details:      
 
Domain Number - Region: 257-297
Classification Level Classification E-value
Superfamily LysM domain 0.00916
Family LysM domain 0.0088
Further Details:      
 
Domain Number - Region: 172-226
Classification Level Classification E-value
Superfamily TSP9-like 0.0981
Family TSP9-like 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) W2CVI0
Sequence length 354
Comment (tr|W2CVI0|W2CVI0_9BACT) N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ETK11120.1} KW=Complete proteome OX=1411915 OS=Tannerella sp. oral taxon BU063 isolate Cell 8/11. GN=T235_17090 OC=Tannerella.
Sequence
MIPRCIRYFILIFYTGFTIVAAGHAERKRHPAYEKYITQYGYIAVQQGDRYNIPPSITLA
QALHESGAGLSRLSLESNNHFGIKCHKDWKGARTYWDDDLKDECFRKYNNVAESYEDHSR
FLVDKKRYSKLFLLRKTDYRGWAKGLQECGYATDRAYANKLIKMIEDYELYLFDTGKRIA
REVQEKTRNEQPRTTPTTPSQKPSTRPLTEPGKKEGTFFERLFGKKKAEQPQPSSPEEKG
LKPRDVYKTGGLLYTIARYNDTFDRIAQDLGFTARELARFNESPENFSLRRGDIVYLEKK
KKRADMPHLYHQVQIGESMHSISQYYGIQVSTLYALNEKNQSYVPREGETLKLR
Download sequence
Identical sequences W2C395 W2CVI0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]