SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1D6NAQ3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1D6NAQ3
Domain Number 1 Region: 400-481,560-626
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.31e-19
Family Canonical RBD 0.0089
Further Details:      
 
Domain Number 2 Region: 911-965
Classification Level Classification E-value
Superfamily SPOC domain-like 0.0000322
Family SPOC domain 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A1D6NAQ3
Sequence length 996
Comment (tr|A0A1D6NAQ3|A0A1D6NAQ3_MAIZE) Nucleic acid binding {ECO:0000313|EMBL:ONM37619.1} KW=Complete proteome; Reference proteome OX=4577 OS=Zea mays (Maize). GN=ZEAMMB73_Zm00001d043347 OC=Zea.
Sequence
MYNCNMATVKRGEDLKSVPYKTAKACIIGLTYICSAASSEELKSSVMKGICSVVYRTVLS
FFISTLEGKDIYRMDYTKRAMLQDPVTLLDTLKLELDNAKQPTIDNLSELGAICLLCTFL
LFPENILEACFKLLDSAECDDVKGEGLYLLNQLTCHLTCNAANDAMGDKIDEQCPVMEGN
LSDTNKFVDSNPVVSENAMEPNECYITMAISRHPFLRRWILSRYKKLCDSCKPAVVSEVS
SCLKVLGSLSEPSDDKSHTGNESSVLEKLDNNVRENMRPDELISSSEQGALAKTESVDNY
GNKFSQNKNVDMVRSDNQKSDELTDAKLDDFKGGTVVSDAQHQGSRSDLLMPKSVYDSAG
GSTSLTSPGQHFGRAKHLFSEPFDIYGTYVARDVISVSKELWVGSLGNRATEALVRSKFE
EFGPLVNFLFYPSRKFSLVEYRNILHAVHACGYMQGSSIWGGFLQVKYLDRLIGSKGVIR
GIAIGESRHVYVAKVKNKKDKDEVFDDLKMAGLKWPSGITDIPGENALLLEFETAVDAAT
AKFYIRHQARPNVCSRDMNLPGHQLLVQNIDHSVPDIDLINAFSQFGEVIRWQINRADSN
CFIVYRSQDAAARAKSHLHGARFGLKSISIESRTYSAGSVHDKTVSPVAPLLGQSVPDNS
VRHEIRNPIVPGYHAGYAAPGDRPIYGPPPPNTSRAPQGNFPCPPVSTHHGSVMPPPPIQ
TSFVRPMYPGPGSPWENTTPNPPPFSHVSPRMMPGSNFRVNPASLPFVPSCVTPVSQLPG
GSAQHSEKMPPSLPLPTVAPPPFTPLDMPPTHPPPLPISQPPSVPPPPNSPPPQPFADSS
DSQKPSSHPQWQGPLLKSGLHYCRIYASRIELDACRYENTVSEPAEWPSALDVTKRTAFQ
HVKTTFNNTPPNKREVCRLVPCSNGDQRGFRDFISYLVQKECAGVIRIPAVKAMWTRILF
ILPPTSDACGMVGIPPLPADTMIVVTLPKETTVEAS
Download sequence
Identical sequences A0A1D6NAQ3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]