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Domain assignment for A0A1U7QVH1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A1U7QVH1
Domain Number 1 Region: 198-234
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000101
Family Retrovirus zinc finger-like domains 0.0039
Further Details:      
 
Domain Number 2 Region: 63-87
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000000144
Family CCCH zinc finger 0.0045
Further Details:      
 
Domain Number 3 Region: 145-172
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000392
Family CCCH zinc finger 0.004
Further Details:      
 
Weak hits

Sequence:  A0A1U7QVH1
Domain Number - Region: 38-59
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000903
Family CCCH zinc finger 0.0058
Further Details:      
 
Domain Number - Region: 119-143
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00392
Family CCCH zinc finger 0.0069
Further Details:      
 
Domain Number - Region: 91-119
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0262
Family CCCH zinc finger 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A1U7QVH1
Sequence length 243
Comment (tr|A0A1U7QVH1|A0A1U7QVH1_MESAU) cleavage and polyadenylation specificity factor subunit 4 isoform X4 {ECO:0000313|RefSeq:XP_005079972.1} KW=Complete proteome; Reference proteome OX=10036 OS=Mesocricetus auratus (Golden hamster). GN=Cpsf4 OC=Muroidea; Cricetidae; Cricetinae; Mesocricetus.
Sequence
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKRAPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
Download sequence
Identical sequences A0A1S3AKF1 A0A1U7QVH1 A0A287CS09 B2LVG5 Q5FVR7
10116.ENSRNOP00000046991 ENSRNOP00000001304 NP_001012351.1.100692 NP_001012351.1.4139 NP_001278178.1.92730 XP_004629701.1.9945 XP_004692008.1.23501 XP_004774999.1.14098 XP_005079972.1.91757 XP_005339794.1.77405 XP_005368122.1.66349 XP_005598564.1.31192 XP_006748329.1.47382 XP_006913415.1.64745 XP_006942011.1.62641 XP_006982732.1.50099 XP_007536346.1.11023 XP_007615092.1.28591 XP_007648508.1.69978 XP_008139598.1.99482 XP_008696586.1.72690 XP_011229322.1.58354 XP_011383907.1.92234 XP_013008090.1.53824 XP_014651101.1.5094 XP_014711468.1.49734 XP_016073267.1.3490 XP_019278181.1.44245 XP_020017329.1.5219 XP_021042899.1.100879 XP_021535894.1.83697 ENSRNOP00000046991 ENSMUSP00000124899

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