SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A1U7W016 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A1U7W016
Domain Number 1 Region: 252-647
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 1.11e-92
Family Regulator of chromosome condensation RCC1 0.001
Further Details:      
 
Domain Number 2 Region: 14-121
Classification Level Classification E-value
Superfamily PH domain-like 2.01e-24
Family Pleckstrin-homology domain (PH domain) 0.0092
Further Details:      
 
Domain Number 3 Region: 651-717
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000000312
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A1U7W016
Sequence length 949
Comment (tr|A0A1U7W016|A0A1U7W016_NICSY) uncharacterized protein LOC104221230 isoform X2 {ECO:0000313|RefSeq:XP_009770546.1} KW=Complete proteome; Reference proteome OX=4096 OS=Nicotiana sylvestris (Wood tobacco) (South American tobacco). GN=LOC104221230 OC=Nicotianoideae; Nicotianeae; Nicotiana.
Sequence
MNNLRRNSLGERNVEQAITALKRGTYLLKYGRRGKPKFCPFRLSTDETRLIWYVDKEEKQ
LQLSQVSRIIPGQRTAIFLRFPRPEKEYQSFSLLYGKSSLDLICKDKEEAEVWFVALRAL
ISRVNCQKWTSNIGHDATSSEGSTAVTQRSSHSALSSSSGSSSTPYEDPKKNQLVSVPSQ
SPPKKRLERAFSDFLLYNAAAQCSSQRGFAACSLNSRSYGNLDDENGQSSADTIRFSFSS
AISSSSQGSSSATIDTLCDILIWGEGIGDGLLSGGICGCGNVETARKDARLPKTLESAVL
LDAQYIACGSTHAVLITKQGEILSWGEGSGGRLGHGVESDVSSPKLIDTLCGLNVTSAAC
GDYHTCATTISGDLYTWGEGTFNFGLLGHDSGISHWTPKKVKGPLVGKHVSYVSCGPWHS
AAITSVGQLFTFGDGTFGALGHGDRSSTSIPREVETLQGRRTVTVSCGHWHTAAVVEFSF
DDSSSSNSPPRKLFTWGNGDDGQLGHGDNASRLAPCNILQLDDINFCRVACGHSITVALT
TSGQVYTMGKADYGQLGIPGSTGKFPSRVQGKITNCFIEEIACGSFHVVALSSNSQLYTW
GKGGNGQLGHGDNHDRNTPTLVEALKAKQVKHVVCGNNFTAAICLHREVSVADNSICAGC
QSPFNLRRKRHNCYNCGLVFCKVCTSKRSVKASLAPKMNKPYRVCEDCFTKLNKGLDTGL
TCLPPKATIGSLQKNTGEKVKEALPSKQKGLLSRLSSFNSFKQSDNQHPKKNQKQDLNSG
QFSPISNRNTQCEVSQTSSPLMSFSDCPEKLSVSFVGSTSHSQAGSPASLESSSSYSVSL
RSAIAAQAYHEVDLDDSEQTSESLKKEISILKEQVEILTQRSLFLEAELEKKSRQLQEKT
EQARTEMEKNNAAKEVIKTLMMQVKGTTAKAPNDASAEHLISLMTPTVP
Download sequence
Identical sequences A0A1S4A342 A0A1U7W016
XP_009770546.1.57364 XP_016471004.1.3737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]