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Domain assignment for C1FA08 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C1FA08
Domain Number 1 Region: 282-511
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.82e-34
Family mu transposase, core domain 0.042
Further Details:      
 
Weak hits

Sequence:  C1FA08
Domain Number - Region: 160-248
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00358
Family Recombinase DNA-binding domain 0.012
Further Details:      
 
Domain Number - Region: 17-74
Classification Level Classification E-value
Superfamily Putative DNA-binding domain 0.0336
Family Excisionase-like 0.022
Further Details:      
 
Domain Number - Region: 532-596
Classification Level Classification E-value
Superfamily mu transposase, C-terminal domain 0.0863
Family mu transposase, C-terminal domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) C1FA08
Sequence length 697
Comment (tr|C1FA08|C1FA08_ACIC5) Integrase core domain protein {ECO:0000313|EMBL:ACO33799.1} KW=Complete proteome; Reference proteome OX=240015 OS=NBRC 15755 / NCIMB 13165 / 161). GN=ACP_0387 OC=Acidobacterium.
Sequence
MSAAPKLYLVPQAAAHEWLTAEEAIARTGLTDRWLREQARHGSIISRATGRTGRNGKPLR
EYLASSLPASERRVAEACSNAASAMRSLPLFTDSQVALPAKAAPDTLPVGAAAQRQAEER
WAVLQPIVDFDKDPLRYAALRLKDGSQVTSQTRMLEYQAEISGVYSRTLKRWLKRWRDGG
LAALADRNRQDKGLSRWFEEHPEAKDVTAAAYLQPEQSKIAAYEALQRWCSRAGILAPHY
STVRRWLDSDDLPEPVVTLAREGERALKERHLPFLRKAYTDIAPNQIWVSDHMIHDVLVR
NDCFEGAAPNAAIRLRFTAMIDYRSRKPMGYCWTVEGSSRSIALALRRGIERYGAPSTLY
VDNGKDYKRVARGAAPVWKRVASEQFVADVAWVESLGVLSRLGIEVQHCLKYHPQSKHIE
RFFRTLHMRLDRVIAGYTTGNAYRRPGATNALAVAHQRAIKSGHAEASPLLRASELIQLG
TAWLETEYSVAPHRGRGMDGRSPNEVYDGGYPVESRHIPDLSNLDHLFWARAQRKLDSGN
IRLANEFYGPAVGDEVGSANLFTHGSNDVFVHYDENEIAPETAIVTDLDGRVLARVHRVQ
LQPHSAAAQPYIAASMAERMRLKKAARETVRTIRKRADQAGYVPAIDVLRERTQLPAATQ
QHINDRPTARKPKAGQNTVAPPSAVDIATDFLEALSE
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Identical sequences C1FA08
gi|225872072|ref|YP_002753527.1| 240015.ACP_0387 WP_012680784.1.62785

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