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Domain assignment for C8W6X7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C8W6X7
Domain Number 1 Region: 303-472
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.23e-46
Family Ribonuclease PH domain 1-like 0.00000616
Further Details:      
 
Domain Number 2 Region: 4-142
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.21e-40
Family Ribonuclease PH domain 1-like 0.0000267
Further Details:      
 
Domain Number 3 Region: 454-552
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 5.24e-27
Family Ribonuclease PH domain 2-like 0.00017
Further Details:      
 
Domain Number 4 Region: 136-227
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.31e-19
Family Ribonuclease PH domain 2-like 0.0038
Further Details:      
 
Domain Number 5 Region: 610-692
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.06e-18
Family Cold shock DNA-binding domain-like 0.00064
Further Details:      
 
Domain Number 6 Region: 556-632
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000091
Family Eukaryotic type KH-domain (KH-domain type I) 0.003
Further Details:      
 
Domain Number 7 Region: 249-330
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.000000000000119
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) C8W6X7
Sequence length 732
Comment (tr|C8W6X7|C8W6X7_ATOPD) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome; Reference proteome OX=521095 OS=0546) (Streptococcus parvulus) (Peptostreptococcus parvulus). GN=Apar_0788 OC=Atopobiaceae; Atopobium.
Sequence
MTKVTHEFDLYGKHYTLEAGELAKQATGACIVKCGDSTVLLTAVVSKERKDYDFFPLTVD
FIEKMYAVGRVPGGYLKREARPSEKATLTARMIDRPLRPSFPEGFRNEVQIVATSLVADQ
VNAVDTISVMGASAALAVGGVPFEGPLACVRIGRNADTGEFLVNPTYEERDHSDLDLELG
GSSTFISMLEAGADEISEEDMLSAMAFGQEAIAAFCEEQKKFIAKWEEVNGPIVKREYIL
DEPIAEVHDRIFAYYDQMSAALKDADKQSRMQKVADLMDEIKAQFTEEEQELWSRAIAVE
LKALEKHAMRVMVVETGERVDGRVANEIRPIMVKPDYLPLVHGSGLFQRGQTQVLSICTL
GMLNEWQRLDTIEPMDGKRYIHHYNFPPFCTGETGRMGSPKRREIGHGALAERALLPVIP
SEEEFPYTIRVVSEVMESNGSSSMASTCGSTLSLMDAGVPLKRPVSGVAMGLIQENGKTV
VLTDIQGLEDFLGDMDFKVCGTTKGITAMQMDNKATGLTPEILRNALMQAHEGRMFILNK
MLEQIPAPRTETKETAPQIISLSIPIDKIRDVIGSGGKVIRGIQEDTGATVDIQEDGTVF
IAGTNGAAEAAAERIKAIVKVPEVGEEYTGRVVGLQPFGAFVELLPGKDGLLHISRVAQG
RVEKIEDVLAIGDEVKVKVLEVDEKGKISLDRLDKPEAPQGASKKDREEHRSRRQNDTGS
SERRQPRRHHDA
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Identical sequences C8W6X7
WP_012808874.1.33702 gi|257784591|ref|YP_003179808.1| 521095.Apar_0788

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