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Domain assignment for D5EEW8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  D5EEW8
Domain Number 1 Region: 5-129
Classification Level Classification E-value
Superfamily Transcription factor NusA, N-terminal domain 1.1e-34
Family Transcription factor NusA, N-terminal domain 0.0000567
Further Details:      
 
Domain Number 2 Region: 203-280
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 3.99e-29
Family Prokaryotic type KH domain (KH-domain type II) 0.00011
Further Details:      
 
Domain Number 3 Region: 135-202
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000000000351
Family Cold shock DNA-binding domain-like 0.0045
Further Details:      
 
Domain Number 4 Region: 282-344
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 0.000000000000235
Family Prokaryotic type KH domain (KH-domain type II) 0.00032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) D5EEW8
Sequence length 362
Comment (tr|D5EEW8|D5EEW8_AMICL) Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945} KW=Complete proteome; Reference proteome OX=572547 OS=Aminobacterium colombiense (strain DSM 12261 / ALA-1). GN=Amico_0975 OC=Aminobacterium.
Sequence
MQLGRDFVRALKQLTAERGLTSEVIASSLEAALISAYKKYQGGDRNVEVHIDLESGNVSI
YEVRLVVDEVDNPDAQISLIDVQKLGFTDVEVNEYVRIEKNPENFGRIAAQTARQVIIQK
LKDAERQIIFEEFSGRVGDLVNGIIFKSENDQVLVRLNDRTEAILPKEERVINEKYTPGE
RLKFYLLDVRQTTRGPRIVVSRTHPGLLRKLLELEVPEIQEGIIEIKSIVREAGTRAKVA
VQTLDINVDPVGACVGNNGARIKSISQELSGEKIDVIIWSSDPLIFVRNSLSPAKIVKIE
PILEQDKAVTVYARPDQLSLAIGKAGQNVRLAARLTSWKIDIKALEPERMPTLQDIFQDI
IE
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Identical sequences D5EEW8
gi|294101966|ref|YP_003553824.1| WP_013048363.1.58668

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