SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for F1ML85 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F1ML85
Domain Number 1 Region: 291-387
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000000155
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.0051
Further Details:      
 
Domain Number 2 Region: 121-189
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000000196
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.069
Further Details:      
 
Domain Number 3 Region: 37-78
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.000000733
Family HLH, helix-loop-helix DNA-binding domain 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) F1ML85
Sequence length 844
Comment (tr|F1ML85|F1ML85_BOVIN) Uncharacterized protein {ECO:0000313|Ensembl:ENSBTAP00000010187} KW=Complete proteome; Reference proteome OX=9913 OS=Bos taurus (Bovine). GN=AHR OC=Pecora; Bovidae; Bovinae; Bos.
Sequence
MNSSSANITYASRKRRKPVQKTVKPVPAEGIKSNPSKRHRDRLNTELDRLASLLPFPPDV
INKLDKLSVLRLSVSYLRAKSFFDVALKSSPADRNGVQDNCRTKFREGLNLQEGEFLLQA
LNGFVLVVTTDALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPQ
QCPDSGQRIDEANGLSQPAVYYNPDQIPPENSSFMERCFVCRLRCLLDNSSGFLAMNFQG
RLKYLHGQNKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFTPTGCD
AKGKLVLGYTEAELSMRGSGYQFVHAADMLYCAEYHIRMIKTGESGMIVFRLLTKDNRWA
WVQSNARLVYKNGRPDYIIATQRPLTDEEGMEHLNKRNMKLPFMFTTGDAILYEISNPFP
SVMDPLPIKTKNGAGGKESTTTSALSKDSLNPSSLLNAMMQQDEAIYLYPASTSTPFERN
FFSDSLNECSNWQNNVVPMGSDSILKHEQISQSQDMNPTLSGDHTGLFADNRNSDLYNIM
KHLGIDFEDIEHMQQNEEFFRTDFSGEDDFRDIDLTDEILTYVEDSLNKPAFGCSGYPQQ
PSMALNPSCMVQEQLQLDQQQLQPHQRHTTVEQQQQLCQKMKHMQVNSMFANWNANQSVP
LNCPQQDLQQYVFADLPGTSQEFPYKPELDPMPYPQNLIPYSQPGLPPQPQGAQLDFPMG
DFEPAPYPTTASNLEDFVSCLQVPENQQHGLNPQSAMVAPQTCYAGAVSMYQCQPDPQHS
QLAQMQYNPTTPGSQAVVNKFQNGAILNETYPAELNSMRNTEPATRLHPSEARPYPDLTS
SGFL
Download sequence
Identical sequences F1ML85
NP_001192955.1.59421 NP_001192955.1.76553 9913.ENSBTAP00000010187 ENSBTAP00000010187 ENSBTAP00000010187

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]