SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for F1MSM3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F1MSM3
Domain Number 1 Region: 1862-2106
Classification Level Classification E-value
Superfamily Ankyrin repeat 2.29e-53
Family Ankyrin repeat 0.000000056
Further Details:      
 
Domain Number 2 Region: 440-571
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000105
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 3 Region: 1171-1313
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000173
Family Growth factor receptor domain 0.0078
Further Details:      
 
Domain Number 4 Region: 858-988
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000188
Family Growth factor receptor domain 0.009
Further Details:      
 
Domain Number 5 Region: 630-758
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000408
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 6 Region: 289-457
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000104
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 7 Region: 755-796
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000051
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 8 Region: 792-830
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000115
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 9 Region: 142-187
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000145
Family EGF-type module 0.01
Further Details:      
 
Domain Number 10 Region: 604-642
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000448
Family EGF-type module 0.0097
Further Details:      
 
Domain Number 11 Region: 981-1102
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000502
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 12 Region: 178-218
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000803
Family EGF-type module 0.0034
Further Details:      
 
Domain Number 13 Region: 258-301
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000041
Family EGF-type module 0.019
Further Details:      
 
Domain Number 14 Region: 1146-1182
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000541
Family EGF-type module 0.012
Further Details:      
 
Domain Number 15 Region: 220-262
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000293
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 16 Region: 833-869
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000332
Family EGF-type module 0.014
Further Details:      
 
Domain Number 17 Region: 564-606
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000456
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 18 Region: 106-141
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000949
Family EGF-type module 0.02
Further Details:      
 
Domain Number 19 Region: 1490-1523
Classification Level Classification E-value
Superfamily Notch domain 0.000000109
Family Notch domain 0.0045
Further Details:      
 
Domain Number 20 Region: 1530-1562
Classification Level Classification E-value
Superfamily Notch domain 0.000000196
Family Notch domain 0.0045
Further Details:      
 
Domain Number 21 Region: 1309-1353
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000261
Family EGF-type module 0.014
Further Details:      
 
Domain Number 22 Region: 62-101
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000779
Family EGF-type module 0.011
Further Details:      
 
Domain Number 23 Region: 1111-1150
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000162
Family EGF-type module 0.02
Further Details:      
 
Domain Number 24 Region: 1449-1481
Classification Level Classification E-value
Superfamily Notch domain 0.00000235
Family Notch domain 0.00028
Further Details:      
 
Domain Number 25 Region: 1392-1429
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000024
Family EGF-type module 0.026
Further Details:      
 
Domain Number 26 Region: 1346-1386
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000232
Family EGF-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) F1MSM3
Sequence length 2534
Comment (tr|F1MSM3|F1MSM3_BOVIN) Notch 1 {ECO:0000313|Ensembl:ENSBTAP00000017746} KW=Complete proteome; Reference proteome OX=9913 OS=Bos taurus (Bovine). GN=NOTCH1 OC=Pecora; Bovidae; Bovinae; Bos.
Sequence
MPPLLAPLLCLALLPALAARGLRCSQPGETCLNGGKCEVFPNGTEACICGGAFAGQQCQA
PNPCLSAPCKNGGTCHTTEREGLVDYVCGCRLGFSGPLCLTPRDHACLASPCLNGGTCDL
LTLTEYKCLCTPGWSGKTCQQADPCASNPCANGGQCLPFEASYICHCPPGFHGPTCRQDV
NECSQSPGLCHHGGTCLNEVGSYRCVCRPTHTGPHCELPYVPCSPSPCQNGGTCRPTGDT
THECACLPGFTGQNCEENIDDCPGNSCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDEC
QLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASASCFQGATCHDRVASFYC
ECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLG
ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM
PGYEGLHCEVNTDECASSPCLQNGRCLDKINEFVCECPTGFTGHLCQYDVDECASTPCKN
GAKCLDGPNTYTCVCTEGYTGPHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHH
CESNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASNPCDSGTCLDKI
DGYECACEPGYTGSMCNINIDECADSPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVNE
CSSNPCIHGACRDSLNGYKCDCDPGWSGANCDVNNDECESNPCINGGTCKDMTSGYVCAC
REGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPGPCR
NGGECRESEDYESFSCACPAGWQGQTCEIDINECVKSPCRAGASCQNTNGSYRCHCQAGY
TGRNCETDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASSPCRNGAN
CTDCVDSYTCTCPTGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQ
HDVNECDSRPCLHGGTCHDSYGTYTCTCPQGYTGLNCQTLVRWCDSSPCKNDGRCWQTNA
LYRCECHSGWTGLYCDVPSVSCEVAARQQGVNVTHLCRNGGLCMNAGNTHRCHCQAGYTG
SYCEEQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEVNECLSQPCRNGGTCI
DLTNTYKCSCPRGTQGVHCEINVDDCNPPIDPVSRGPKCFNNGTCVDQVGGYSCSCPPGF
VGERCEGDVNECLSNPCDARGTQNCVQHVNAFHCECRAGHTGRRCESVINGCKDRPCKNG
GSCAVASNTARGFICKCPAGFEGATCENDARSCGSLRCLNGGTCIAGPRSPTCLCLGPFT
GPECQFPASSPCVGGNPCYNQGVCEPTAESPFYRCRCPAKFNGLLCHILDYSFGGGVGLD
IPPPQIEETCELPGCREEAGNKVCSLQCNSHACGWDGGDCSLDFDDPWQNCTQSLQCWKY
FSNGRCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYCKDHFRDGHCDQGCNSAECEWDGL
DCAEHVPERLAAGTLVLVVLMPPEQLRNRSLHFLRELSRLLHTNVVFKRDASGQQMIFPY
YGQEPHCRQGSAPRSVGVSTTHALLVLDKASPQGHCAPPGLFLSIVYLEIDNRQCVQSSS
QCFQSATDVAAFLGALASLGSLNIPYKIEAVQSETVEPPPPPPLHFMYVAVVAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNSSDGALMDDNQ
NEWGDEGLEAKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRVSAMAPTPPQGEADAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVEAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYSLVRSPPLHGATLGGTPTLSPPLCSPNGYLGNLKPPMQGKKARKPSTKGLACGG
KEPKDLKARRKKSQDGKGCLLDSGSVMSPVDSLESPHGYLSDVASPPLLPSPFQPSPSVP
LNHLPGMPETHLGVSHLSVAAKPEMAVLSGGSRLAFEAGPPRLSHLPVASSTSTILGSGG
SGGSGAVNFTVGGAAGLNGQCEWLSRLQNGLVPNQYNPLRGGVTPGTLSTQAAGLQHGTV
GPLHAPALSQVMTYQALPSTRLASQPHLVQPQQNLQMQPPSMPPQPNLQPHLGVSSAASG
HLGRSFLGGELSQADMQPLGPGNLAAHTVLPQDGQVLPTSLPSTLAPPTMAPPMTTAQFL
TPPSQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPT
SVPSQIAHVPEAFK
Download sequence
Identical sequences F1MSM3
ENSBTAP00000017746 ENSBTAP00000017746

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