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Domain assignment for F7D1C2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F7D1C2
Domain Number 1 Region: 396-510,630-776
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.85e-62
Family Phosphate binding protein-like 0.00000000254
Further Details:      
 
Domain Number 2 Region: 26-377
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5.05e-53
Family L-arabinose binding protein-like 0.0061
Further Details:      
 
Domain Number 3 Region: 526-629
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.0000334
Family Voltage-gated potassium channels 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) F7D1C2
Sequence length 895
Comment (tr|F7D1C2|F7D1C2_CALJA) Glutamate ionotropic receptor AMPA type subunit 1 {ECO:0000313|Ensembl:ENSCJAP00000018166} KW=Complete proteome; Reference proteome OX=9483 OS=Callithrix jacchus (White-tufted-ear marmoset). GN=GRIA1 OC=Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix.
Sequence
WVLLCFLTPVKLHSEVWGLFPNQQSQEHAAFRFALSQLTEPPKLLPQIDIVNISDSFEMT
YRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQFVLQLRPELQD
ALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTTEEGYRMLFQD
LEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGANVT
GFQLVNYTDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQR
IDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEM
KHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYVMLKKNANQFEG
NDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA
PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS
VVLFLVSRFSPYEWHSEELEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS
GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKE
FFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKP
CDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKD
SGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMKGFCLIPQQSIN
EAIRTSTLPRNSGAGASGGGSGENGRVVSHDFPKSMQSIPCMSHSSGMPLGATGL
Download sequence
Identical sequences F7D1C2
ENSCJAP00000018166

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