SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for G1NV35 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  G1NV35
Domain Number 1 Region: 638-893
Classification Level Classification E-value
Superfamily YWTD domain 3.79e-56
Family YWTD domain 0.00000581
Further Details:      
 
Domain Number 2 Region: 26-286
Classification Level Classification E-value
Superfamily YWTD domain 2.49e-55
Family YWTD domain 0.00000166
Further Details:      
 
Domain Number 3 Region: 337-567
Classification Level Classification E-value
Superfamily YWTD domain 3.14e-51
Family YWTD domain 0.00000321
Further Details:      
 
Domain Number 4 Region: 940-1199
Classification Level Classification E-value
Superfamily YWTD domain 7.32e-39
Family YWTD domain 0.0000653
Further Details:      
 
Domain Number 5 Region: 1327-1365
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000249
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 6 Region: 1289-1324
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000903
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 7 Region: 593-639
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000198
Family EGF-type module 0.0091
Further Details:      
 
Domain Number 8 Region: 896-943
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000199
Family EGF-type module 0.016
Further Details:      
 
Domain Number 9 Region: 1250-1288
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000445
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 10 Region: 291-334
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000649
Family EGF-type module 0.011
Further Details:      
 
Domain Number 11 Region: 1207-1259
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000887
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) G1NV35
Sequence length 1607
Comment (tr|G1NV35|G1NV35_MYOLU) Low-density lipoprotein receptor-related protein {ECO:0000256|PIRNR:PIRNR036314} KW=Complete proteome; Reference proteome OX=59463 OS=Myotis lucifugus (Little brown bat). GN=LRP5 OC=Vespertilionidae; Myotis.
Sequence
IAPAPGCVPWPSQWSSRVASVPTASPLLLFANRRDVRLVDAGGVKLESTVVVSGLEDAAA
VDFQFSKGTVYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDS
ETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDGSTRK
VIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLSG
DTLYWTDWQTRSIHACNKRTGEKRKEILRALYSPMDIQVLSPERQPYIHTQCEEDNGGCS
HLCLLSPREPFYTCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVL
QVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVA
RNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPMMGLMYWTDWGENPKIECA
NLDGQERRVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRMLLEDKLPH
IFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCAD
QNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIVPEAFLVFTSRATIHRISLETNNNDV
AIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFLNGSSVEHVIEFGLDYPEGMAVDW
MGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIV
RAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERIVIADDLPH
PFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCV
PGNGQCGQLCLAVPGGHRCSCASHYTLDPSSRNCSPPSTFLLFSQKNAISRMIPDDQHSP
DLILPLHGLRNVKAIDYDPLDKFIYWVDGRQNIKRARDDGTQPFILTTPSPNQSPDRQPH
DLSIDVYSRTLFWTCEATNTINVHRLDGDAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQ
DRTAKIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRL
TLEDANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVAHLTGIHAVEDI
SLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFTCA
TGEHRLHPAWRCDGFPECDDQSDEEGCPVCSDAQFPCARGQCVDLRLRCDGEADCQDRSD
EADCDALCLPNQFRCASGQCILIKQQCDSFPDCIDGSDELMCEITKPPLDEGPAHSSAIG
PVIGIILSLFVMGGVYFVCQRVVCQRYTGANGPFPHEYVSGTPHVPLNFIAPGASQHGPF
TGISCGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTKATLYPPILNPPPSPATDP
SLYNVDVFYSSNIPAPARPYRPYIIRGIAPPTTPCSTDVCDSDYSASRWKASKYYLDLNS
DSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLFPPPPSPCTDSS
Download sequence
Identical sequences G1NV35
ENSMLUP00000001113 ENSMLUP00000001113

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