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Domain assignment for H3H5S1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  H3H5S1
Domain Number 1 Region: 219-361
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.92e-22
Family Retroviral integrase, catalytic domain 0.009
Further Details:      
 
Domain Number 2 Region: 546-692,726-863
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 0.000000000116
Family Reverse transcriptase 0.023
Further Details:      
 
Weak hits

Sequence:  H3H5S1
Domain Number - Region: 16-49
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000134
Family Retrovirus zinc finger-like domains 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) H3H5S1
Sequence length 923
Comment (tr|H3H5S1|H3H5S1_PHYRM) Uncharacterized protein {ECO:0000313|EnsemblProtists:Phyra86000} KW=Complete proteome; Reference proteome OX=164328 OS=Phytophthora ramorum (Sudden oak death agent). GN= OC=Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.
Sequence
RVADANAATVERKKRSKTSNSKSSITCWDCGGAGHTAAFCPRQPDGRERQQAARRQSRGW
RTVVARRRGKLKIEALVDDGAGACITRAFELENVYFVPNFAKTLLSVSTLIHAGHEVVFT
PAGCTVYQPKRRGRVACIARDGNGVYPLLTKDQAHVDDAIQVALAISVLGTDLATWHRRF
GHVNYKTLKEMAKNKVVKGLRIAKGAKPPMCVVCAITKAVDRAPPKVYPLKRKNEAASKV
SAFLKMIERQAAIPVSEVKVVRTDGGTEFINKDFRRVLQREGIVQEHTARYSSSQNGVAE
RAIRTLTEMAAAMLTDSGLLHSMWADALKHAAFLRNRIPKRGQTIRPHEKLFKRKPDISK
VPVFGQAVSVRVPEEIRIKYQRFKKDSCEELGAFVGCTDEVKGFNILLPGPGQPVFEARG
ATVINRMLHEIEPVGEDNEAGFEYDARRSPRWEEWHRAIVKEVQALFDNGTFEWVDAPDG
ATVLDHTIQFRLKTGALGELVQFKARLCARGDHQHFLVDYVATYAPVAPLTTVRVFFVLV
AKLGLVVRQGNVPAAYVKADLQEVIYMKPVAGYSGSTNVGKVWRLRKALYGLKQAGSEWN
KAIDEYFRSQGLQPTEVDPCLYFAYTHGSLLLVCLYVDDLLVAHASETKVSRMMAALLQQ
YGVKDLGAPNSFLGVHIERDKSGTVLLSQSAYIDEVLHGFAMDGARQQRTPMVPNTRLDE
LNDDPSPSESALIRRMPYREAVGALLYLARVTRPDISFTVGQLARHCARPRKVAWDAAKF
LMRYLGSTRNKKLRLAPTGDDILVTSDADWANDKTDRKSISGRVVFLFGCPVTWCSKKQT
IVAKLSTAAEYMSADYAVEDGEQVRLMVEQVLKRDVPMTLAMDSQPAIARLQREGLSETQ
KTVDVWYKRVKGMLKDGKIAVEQ
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Identical sequences H3H5S1
164328.JGI86000 jgi|Phyra1_1|86000|fgenesh1_pg.C_scaffold_412000003

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