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Domain assignment for K9YVD0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  K9YVD0
Domain Number 1 Region: 61-212
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 3.61e-53
Family Sigma2 domain of RNA polymerase sigma factors 0.0000693
Further Details:      
 
Domain Number 2 Region: 273-368
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 3.55e-24
Family Sigma4 domain 0.0014
Further Details:      
 
Domain Number 3 Region: 215-288
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 3.4e-17
Family Sigma3 domain 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) K9YVD0
Sequence length 375
Comment (tr|K9YVD0|K9YVD0_DACSA) RNA polymerase sigma factor, cyanobacterial RpoD-like family {ECO:0000313|EMBL:AFZ50477.1} KW=Complete proteome OX=13035 OS=Dactylococcopsis salina PCC 8305. GN=Dacsa_1820 OC=Dactylococcopsis.
Sequence
MTDIKLMTSQNTKPEESLTPIEGIETIIAPLEETDASEGQLVEVDFSQEDDGDVNPYQGS
KSDDTVGAFFKEMARYPLLQPDEEIELAQKVKFLADMENKRQELAIESGSSPTKEELAAT
VSLSVKELERKLHQGRLAKRQMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRATE
KFDPNKGYKFSTYAYWWIRQAITRTIANDARTIRLPIHIVEKLNKLKKVQRDLKQELQRN
PTEEELAAGLDISQSQLHQLLQLRRQSLSLNHRVGKGEDTELLELLEDHEMRLPEDQMNE
TMMNQELSDVLGDVLNEREKDVISLRYGLNTSHPYTLEEVGYFLNLSRERVRQIQSKAMR
KLRRPQVARRLKGWL
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Identical sequences K9YVD0
gi|428780048|ref|YP_007171834.1| WP_015229474.1.8022

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