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Domain assignment for L9JB33 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  L9JB33
Domain Number 1 Region: 134-390
Classification Level Classification E-value
Superfamily vWA-like 6.45e-83
Family Integrin A (or I) domain 0.00000000043
Further Details:      
 
Domain Number 2 Region: 386-476
Classification Level Classification E-value
Superfamily Integrin domains 1.31e-33
Family Integrin domains 0.00000392
Further Details:      
 
Domain Number 3 Region: 642-726
Classification Level Classification E-value
Superfamily Integrin beta tail domain 7.06e-23
Family Integrin beta tail domain 0.00000442
Further Details:      
 
Domain Number 4 Region: 30-84
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000225
Family Plexin repeat 0.0000447
Further Details:      
 
Domain Number 5 Region: 600-641
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000012
Family Integrin beta EGF-like domains 0.00033
Further Details:      
 
Domain Number 6 Region: 558-596
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000307
Family Integrin beta EGF-like domains 0.0015
Further Details:      
 
Weak hits

Sequence:  L9JB33
Domain Number - Region: 526-558
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0212
Family Integrin beta EGF-like domains 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) L9JB33
Sequence length 798
Comment (tr|L9JB33|L9JB33_TUPCH) Integrin beta {ECO:0000256|RuleBase:RU000633} KW=Complete proteome; Reference proteome OX=246437 OS=Tupaia chinensis (Chinese tree shrew). GN=TREES_T100007939 OC=Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.
Sequence
MDSSTYLLIISFEQESDLGWTGQSRPQGPNICTTRGVSSCQQCLAVSPVCAWCSDEALPL
GSPRCNLKENLLKDDCASEYIEFPISEAQILEARPLSDKGSGDSSQVTQVSPQRIALRLR
PDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLASQMRKLTSNLRIGF
GAFVDKPVSPYMFISPPKALKNPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS
RNRDAPEGGFDAIMQATVCDVSVEGLECQEKIGWRNDASHLLVFTTDAKTHIALDGRLAG
IVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVDLYQNYSEL
IPGTTVGVLSADSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEIIPGLK
SCVGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLTVQVTFDCDCDCQAQAEPY
SRRCNNGNGTYECGVCRCGPGWLGSQCECSEEDYHPSQQDECSPREGQPICSQRGECLCG
QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRT
DTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGI
LHEENTCNRYCRDEIEPVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDHSGKSILYVVEE
PECPKGPDILVVLLSVMGAILLIGLATLLIWKLLITIHDRKEFAKFEEERARAKWDTANN
PLYKEATSTFTNITYRGT
Download sequence
Identical sequences L9JB33

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