SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q7NCY7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q7NCY7
Domain Number 1 Region: 298-500
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 6.93e-53
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000298
Further Details:      
 
Domain Number 2 Region: 828-1023
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 6.28e-48
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000476
Further Details:      
 
Domain Number 3 Region: 39-131
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.05e-27
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00023
Further Details:      
 
Domain Number 4 Region: 563-666
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.88e-26
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.001
Further Details:      
 
Domain Number 5 Region: 141-183,276-331
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 3.31e-25
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0029
Further Details:      
 
Domain Number 6 Region: 670-718,805-854
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.2e-24
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0021
Further Details:      
 
Domain Number 7 Region: 719-804
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 9.16e-21
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00067
Further Details:      
 
Domain Number 8 Region: 184-274
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 2.62e-20
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q7NCY7
Sequence length 1059
Comment (tr|Q7NCY7|Q7NCY7_GLOVI) RND multidrug efflux transporter {ECO:0000313|EMBL:BAC90780.1} KW=Complete proteome; Reference proteome OX=251221 OS=Gloeobacter violaceus (strain PCC 7421). GN=gll2839 OC=Gloeobacteraceae; Gloeobacter.
Sequence
MFVNYFVQRPILTIACSVIIVLGGWVSIRTLPVDQYPDIALPQVVVTARYDGASAEVVES
TVTTPLEQQINGAESMRYMTSTSSNDGTSTITVTFDLARNIDDAAMDIQNRLTAVQGRLP
EEVRRTGVTIRKNASQVTVAFGLYAKNNEYDNTFISNYADLYISDALRRVKGVGDVRIFG
ERRYSMRLWLDADRLAARRLSAVDVVRALETQNLQVGAGQVGQPPSLDGQPYQISVRAVG
RLKSPAQFDNLILKRGADGALVRLKDVGRTELGAEDYTTFLRFTGRNAVGIAVSQLPGAN
TLDVYREVKAELDRQARAFPPGLEYEIAFDSASMVDESIHEVVKTLIEAVVLVVAVMFIF
LQDWRGTLIPAIAIPVSLVGTFIFVKLLGFSINTLTLFGITLAAGLVVDDAIVVVENIVR
YSRERGLTVRAAAPEAMREVFGAVIATSLVLVAVFVPVAFFPGTAGRLYQQFALTLTFSI
ALSTFIALTLTPTLSALLLRAEPPRHWLFDRINDLIDWLRRGYARSLGFALRFRSAMLGV
FVCLLGLAWWLFGKVPPGFVPNEDQSYFVVFVQCPEGSSLDYTNKVMLQVEQELRKLPEL
ARMFAIGGYSPSGNAPNKATIFPHLLPLAERRQPSQSVDAIIDKVRGPLSRIPGATVAAF
PMPAIQQGVGQFGGFQLQVQDQRNLGLETLAGVTRTLVEQGNAQPGLSGLFSSFSINDPQ
LVVEVNREKAEALAVAPDEVLKALQIYMGSLYVNDFEMFNRPYRVYVQADRRFRSTPQDL
RRFYVRSQTGAMIPLGNLVTVSRTVAPQIINHYNMLRSAEVNGAPAEGFSSGQAIEQMQK
LAEQVLPQGIRFQWSGVSLEQIESGNKALFIFVLGVVFVFLVLAAQYESLTDPLVIMLSV
PLAIVGALGAQALRGLENDIYCQIGLVMLIGLASKNAILIVEFANQLCKEGLTRIQAVSK
AAQIRLRPILMTSFAFILGVVPLVMAEGAGAAGRQSLGTAVFGGMLVSTALSLYIVPVLY
IVIGALRERFKGDRTAPDLLTHDSSTQSNALEIPSPSQK
Download sequence
Identical sequences Q7NCY7
NP_925785.1.44878 gi|37522408|ref|NP_925785.1| 251221.gll2839

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]