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Domain assignment for R0M6N4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  R0M6N4
Domain Number 1 Region: 618-873
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-56
Family YWTD domain 0.00000336
Further Details:      
 
Domain Number 2 Region: 7-266
Classification Level Classification E-value
Superfamily YWTD domain 3.27e-54
Family YWTD domain 0.00000158
Further Details:      
 
Domain Number 3 Region: 317-552
Classification Level Classification E-value
Superfamily YWTD domain 2.22e-49
Family YWTD domain 0.00000361
Further Details:      
 
Domain Number 4 Region: 921-1180
Classification Level Classification E-value
Superfamily YWTD domain 1.03e-40
Family YWTD domain 0.0000386
Further Details:      
 
Domain Number 5 Region: 875-923
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000335
Family EGF-type module 0.018
Further Details:      
 
Domain Number 6 Region: 1311-1349
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000956
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 7 Region: 1233-1271
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 8 Region: 573-620
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000228
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 9 Region: 1273-1309
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000393
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 10 Region: 269-311
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000311
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 11 Region: 1190-1243
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000762
Family EGF-type module 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) R0M6N4
Sequence length 1598
Comment (tr|R0M6N4|R0M6N4_ANAPL) Low-density lipoprotein receptor-related protein 6 {ECO:0000313|EMBL:EOB08293.1} OX=8839 OS=Anas platyrhynchos (Mallard) (Anas boschas). GN=Anapl_01490 OC=Anatinae; Anas.
Sequence
LPLEAAPLLLYANRRDLRLVDAAHGKENATVIVGGLEDAAAVDFVFLKGLIYWSDVSEEA
IKRTEFNKSGSVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW
QELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQ
KLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDTLYWTDWNTHSILACSKYS
GEDLREIHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMSPTKPSYQCACPTGV
KLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYI
YWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG
TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRIVLVNTSLGWPNG
LALDYEESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYVYWTDWQRRS
IERVQKRTAEREIIIDQLPDLMGLKATNVRQIIGTNPCAEDNGGCSHLCLYRPQGLRCAC
PIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDN
RIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL
DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRAN
GLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDWSRRS
IERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVGGFVC
GCPAHYSLNADNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILPIHSLRNVRAIDYDP
LDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLSIDIYSRYIYWTCEA
TNVINVTRLDGRSMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTERE
VLFFSGLSKPIALAIDSQLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE
NWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNIQEYRQHPCSQDNGGC
SHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFT
ECEDHSDEKNCPVCSDTQFQCESGQCIDSALRCNGEANCQDNSDEKNCEVLCLTDQFRCA
SGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTVFVVGAMYFIC
QRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMSRGKSVISSLSIMGG
SSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPSTHRS
YSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTAATAKGYTSDLNYDSEPVPPPPTPRS
QYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
Download sequence
Identical sequences R0M6N4

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