SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for U3FQK3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  U3FQK3
Domain Number 1 Region: 252-343
Classification Level Classification E-value
Superfamily TAFH domain-like 3.01e-33
Family TAFH domain-like 0.0000319
Further Details:      
 
Domain Number 2 Region: 653-700
Classification Level Classification E-value
Superfamily Histone-fold 0.0000000000000259
Family TBP-associated factors, TAFs 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) U3FQK3
Sequence length 861
Comment (tr|U3FQK3|U3FQK3_CALJA) Transcription initiation factor TFIID subunit 4B {ECO:0000313|EMBL:JAB48546.1} OX=9483 OS=Callithrix jacchus (White-tufted-ear marmoset). GN=TAF4B OC=Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix.
Sequence
MPAGLTDPARAAPPATVSASGTVIMAPAGALPVRVESTPVALGAVTKAPVSACVEPTASQ
PLRSPVGTLVTKVAPVSAPPKLSSGPRLPAPQIVAVKAPNTTIQFPANLQLPPGTVLIKS
NSGQLMLVSPQQAVTRAETTSNITSRPAVPANPQTVKICTVPNSSSQLIKKVAVAPVKKL
AQIGTTVVTTVPKPSSVQSVTLPTSVVTVTPGKPVNTVTALKPTSLGASSTPSNEPNLKA
ENSAAVQINHSPTMIENVKKCKNFLAMLIKLACGGSQSPEMGQNVKKLVEQLLDAKIEAE
EFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTSNEVVVANCTTTV
TTSPVVTTTVSSGQSEKSFIVSGATAPRTVSVQTLNPLAGPGGAKAGVVTLQSVGPAAAT
GGTTAGTVLLQTSKPLVTSVPNTVTAVSLQPEKPVVPGTAVTLSLPAVTFGETSGAAICL
PSVKPIVTSAGTTSDKPVIGTPIQIKLTQPGPVLSQPAGIPQAVKVKQLVVQQPSGGNEK
QVTTLSHSSALTIQKSGQNAMPVNTVIPTSQFPPASILKQITLPGNKILSLQASPTQKNK
IKENGTTCFRDEDDINDVTSMAGVSLNEENACILATNSELVGTLIQSCKDEPFLFIGALQ
KRILDIGKKHDITELNSDALNLISHATQERLRGLLEKLTAIAQHRMTTYKASENYILCSD
TRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRCNKEDPEQLRLKQKAKELQQLELAQI
QHRDANLTALAAIGPRKKRPLESGSEGLKDNLLASGTSSLTATKQLLRPRITRICLRDLI
FCMEQEREMKYSRALYLALLK
Download sequence
Identical sequences U3FQK3
XP_002757182.1.60252

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]