SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for V5V7R0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  V5V7R0
Domain Number 1 Region: 263-337
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.03e-16
Family Pentapeptide repeats 0.0029
Further Details:      
 
Weak hits

Sequence:  V5V7R0
Domain Number - Region: 26-149
Classification Level Classification E-value
Superfamily MFS general substrate transporter 0.0379
Family LacY-like proton/sugar symporter 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) V5V7R0
Sequence length 398
Comment (tr|V5V7R0|V5V7R0_9CYAN) Pentapeptide repeat-containing protein RfrA {ECO:0000313|EMBL:AHB89391.1} KW=Complete proteome OX=1394889 OS=Thermosynechococcus sp. NK55a. GN=NK55_10760 OC=Thermosynechococcus.
Sequence
MGEDKMTLRENQTAAALRLSKVLAARNRWRTGWQSLRSVLMPIAMVTVVVAWGLDWDALG
VVAALVLGGLSFPLVWTSTYHWFTEDLTEQQRQFILAALGLSLTVVALIAMTGAMDWIRA
RFQGTNWDAVGALAEGFGALGQILVALLAAYVAWRQYVISRDLTIQQNRITQQQTIDSYF
QGIADLILDDEGLLEDWPPERAIAEGRTAAILAGLDAEGKAKIIRFLSGAKLLSPLKRDR
RLGRAIFDGLGGYEEDIEYGVRVINLGSMLAGADLSGTDLRWTELSDANLTGTLFRNCNL
TRANLAGAILQGADFTNADLSRVRLFYGTVEQASPRDRLNPPNFRTGAQTGAVVEDVNFT
NVKNLSEEQRYYCCAWSGSRSRETIPGGCEGVPNKLGR
Download sequence
Identical sequences V5V7R0
gi|571028784|ref|YP_008900904.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]