SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for W3RCT8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  W3RCT8
Domain Number 1 Region: 58-325
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.96e-38
Family Phosphate binding protein-like 0.02
Further Details:      
 
Domain Number 2 Region: 372-465
Classification Level Classification E-value
Superfamily NosL/MerB-like 0.000000000000243
Family NosL-like 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) W3RCT8
Sequence length 468
Comment (tr|W3RCT8|W3RCT8_9BRAD) Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR74955.1} KW=Complete proteome; Reference proteome OX=1429916 OS=Afipia sp. P52-10. GN=X566_19410 OC=Bradyrhizobiaceae; Afipia.
Sequence
MVRFGLGSFVAAILMAATAQAETIRVAVGTQDTTINCATGGLLIRELKLLEKYLPRDGKY
KDVTYDIQWKNFTSGAPLTNEMVAGKLDFGAMADFPGSLNGVAFQKSGRRSLFITTLSGS
TKGSGNGIVVPVNSPVQSIAELKGKTISVPFASTSHGMLLRAIKAQGWNPESDVNIITQA
PEVAGPALQAGKIDAHADFVPFAELFPWRGFARKVFDGSQADAPTFHGALVDSAYAAKYP
EIVVAYLQAALEADRLIAAEPEKYSELIAQVTGIEAEVNYLFHGPLGLQTRDLTWKPEYR
QAVQTSIETLKLLKRADGDLDINAFVTDTYIRAAFAKTGRDYDAELKDYAQRPLQAKDAD
TGAAITDVKRVAQIWVRGEPLVRHYSSAEGALKALTGLEKDGKDIRVVYAQDQGSGIKLF
AQQAWFVRASGGELSAFLTREAADAWAKAQGGQVLDYAAARASIVASR
Download sequence
Identical sequences W3RCT8
WP_034470430.1.19247

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]