SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for URET_02238 from Uncinocarpus reesii 1704

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  URET_02238
Domain Number 1 Region: 49-208
Classification Level Classification E-value
Superfamily E set domains 0.000000357
Family Arrestin/Vps26-like 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) URET_02238
Sequence length 814
Comment | UREG_02238 | Uncinocarpus reesii pH-response regulator protein palF/RIM8 (815 aa)
Sequence
MELDCPNGQATSASPARKRSILSKFTSRFSNRNRNISEFYIQPDDPWKSYSPGDAVKGAV
CLTVVKPVRITHLVLCLHGYAKVYKNPVAPGETAEDSGFIATGRGRRNGEYLGNGLATLF
EDEVVLCGDGRLKEGIYKFRFELCFPPYGLPSSINFERGTISYVLTSTLTRPTTISPTMT
CDKRILLLEAIDVANLPVPKPRVISLEPVSKRSKSRSKTKTNSTSSDAPARASSTDPQSS
DPGPPLSPVPSERSNSSCVSNSTQSFQIVSEPSSARCMAQRSDELWNGATSSASQEITAT
TRVLRSGVLPGDLLPVNISIKHTKPIRSPSGVIITLYRQGRIDMYPQLPIGTPEKGKKPV
YEDYYPKSRTGLGGLSFGVTRTSSVFRKDLSQLFCPLIVDPGTMVADIKTSIRIPEDAFP
TITRVPGAMISFRYYVEVVMDIRGKLAGQDRLRPRLNMMTNNLYGSGKVNTAAEIQRGMT
TSNVAGNILDTDQVRRDKSVIACAFEIIVGSKDSSRTQRQDAPSESEQTQAPSTSQDEPF
DQQPTTQRIQFVDQHPPQHSEYDADGGADWSSHPPPHSEYSTESPPPTFIPPAQPEEVVD
EKTRLRRAEEMLLPSAPPAGDEDAAAGPSSVLLAQPSAPTLSEDHSHYSHIHDHQHQSDF
NSLPRNGSPAASALLRIRLLQPTEPQTIIHVRLSTLFILLLPLLTPGQNLPAMRMQTLPP
PNPTPQTINRNLSGNASLIKLVLLPIRTLTLTTLDSMLPQISNPPRQFSQRKILSSAIPL
LELSPKSEENRCLDTSAETGIHNLVTSWRLEVCL
Download sequence
Identical sequences C4JES8
URET_02238 XP_002542722.1.76999

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]