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Domain assignment for gi|479317902|ref|YP_007857953.1| from Streptomyces sp. PAMC26508

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|479317902|ref|YP_007857953.1|
Domain Number 1 Region: 180-385
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 1.92e-45
Family ATP-dependent DNA ligase catalytic domain 0.0005
Further Details:      
 
Domain Number 2 Region: 387-506
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.23e-30
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.0013
Further Details:      
 
Domain Number 3 Region: 7-202
Classification Level Classification E-value
Superfamily ATP-dependent DNA ligase DNA-binding domain 4.45e-28
Family ATP-dependent DNA ligase DNA-binding domain 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|479317902|ref|YP_007857953.1|
Sequence length 511
Comment ATP-dependent DNA ligase [Streptomyces sp. PAMC26508]
Sequence
MLLARIALVSLEVAATSARTRKTALLAALFRDAEPDDVPVVIPYLAGRLPQGRLGIGWST
LRVPVTPAGEPTLTVAGTDAELSAIGALGGPGSQAARKERLTRLLGAATAQEQHFLRGLL
TGEVRQGALDAVAVDALADAAGAPRDEVRRAVMLAGSLGPVARTLLAEGPGALASFRLTV
GRPVQPMLAHTSRSVAEAIDRLGPCVVEEKLDGIRVQVHRDGPQVRVYTRALDDITDRLP
EVAAAVTRLRADRFILDGEAIALGADGRPRPFQETAGRVGSRRDVATAADAVPVVPVFFD
VLSVDGRDLLDLPLSERHRDLASLVPEEMRVRRVAVEYPADERRRAAAVAFSEDTLARGH
EGVVVKGTAAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARRDDG
TFAMLGKTFKGLTDTMLSWQTQRLRELATGDDGHVVTVRPELVVEIAYDGLQSSTRYPEG
VTLRFARVLRYREDKSAEEADTVGTVLSRRG
Download sequence
Identical sequences M9TSM0
gi|479317902|ref|YP_007857953.1| WP_015576171.1.83303

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