SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|37679497|ref|NP_934106.1| from Vibrio vulnificus YJ016

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|37679497|ref|NP_934106.1|
Domain Number 1 Region: 312-416,574-652
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 0.000000000000734
Family Serralysin-like metalloprotease, catalytic (N-terminal) domain 0.078
Further Details:      
 
Weak hits

Sequence:  gi|37679497|ref|NP_934106.1|
Domain Number - Region: 1246-1279
Classification Level Classification E-value
Superfamily Cell wall binding repeat 0.0419
Family Cell wall binding repeat 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|37679497|ref|NP_934106.1|
Sequence length 1368
Comment hypothetical protein VV1313 [Vibrio vulnificus YJ016]
Sequence
MAFRKVILASAIAVALAGCGADDQAYDYLDKDSNQTTIANITSNAPVKIPASNERDAYEI
PLDGIWIFQQTLGDVSRTSGTTPYLYDFINDERLVQLKLTKDGLMGDLVEGDIAFEGEVT
RFEQRQNVSRRLFSLGGAYEAYECAEDSYGDCTNKEAKVSDPDVRWWQKTHFTPDFEKVS
IDDAQRIFKFYLKDKEETTVTHVEFDPKGGVINIEYEHNLIGRNGQPETVTEFFSLVRLD
VIASKGYQPIHYDLPEHHKFGFFKTAYEKLDPNYIENQQGYEGYLVNRFDPRKEKIEYHL
SDEFFRKDANGNLVNKVWLDATVKGFEYMNKSLADKFSPNGRLVPELVLINKDATEPSNV
KVGDIRTNVIHIIPEASEAGLLGFGPSTSNPLTGEILSAYTIMYPGVAQMGVGTAWDELV
ELYNKKELATPYDVQPYGLGSSAALNRDERFVDLSKNTIVGQPETVQELQQSISKVQEQF
SEVVSEENSVQEADILGKQTELEMMMANNMFPAEFSGVSASMVANKTDITELDFFEEGMF
VDSTLPEDALTLKTWNELNLAQRAKVSLAFSTHQYLTTLVHEVGHNLGLRHNFKGSFDGD
NFFTEAQARSLDLKGVSATSSIMDYTPSEIGVHPAFGLYDRAALRFAYQRKVAVHPKVDA
DAQTKEEILAVKRDESQVQFVDLAKKDAAKRLDMSQPSALASLDLGYDLQSQGLQLKEYG
YCTDGRGRNTTETGCLVFDEGTSVEAITDAYIERYDSRSEVVNARRNRVEFNENKRYINK
LFSTWNTFGRMNMVVDDYYQAYFTGNYKTPAEACLDVSTAAKQEACDVTRAAYKQAYFYL
DILKTPEKQCILDMKQELRQPDGTYKQDWAGNSPWSLANTNWLAGQVAGEAYTSKFHLPT
SCFDQDLKEAIESGYRYWTSSSTGKSYRFTHRVIAESKHGDFLNKVTFSNRASEENASYI
GYEAEHLGIWMDKLLAIESLFQPSGLRGVDFALIDLPGVREEVKDLIDHWALGKPLPAAS
AQAIEFGNVNEPYLFVDANGNEVPGISYDPEWKSTEIRATPNRLSWLLNRWYGTNRNGGT
ATAKAYLQSIYKFDSFRTDTYKPEAFEMGRYISMVIDDLPRATHSIEILGRNYYANESNG
LAVQMIEEIKKSDIFVISQYSRSELNSHLAERDNILGNLIGSAAVATTNDAALQNTLATD
PSVTSLRTGKTGTAKWVSALKSQFEASYPGFLSLGHLWGARDSLIASGDMVWTGQCYALD
DLGCMFTNDQNVSGNWYNTAVPPSLAFDGLWKSNNALALVTPAYLMNYDADVASLDAIFR
VSGKSITDYLDRSFGNEKLRREAIEEAGLTNLVVLDPDSSTSVNILVF
Download sequence
Identical sequences Q7MLW3
196600.VV1313 gi|37679497|ref|NP_934106.1| WP_011149993.1.34622

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]