SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|37678597|ref|NP_933206.1| from Vibrio vulnificus YJ016

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|37678597|ref|NP_933206.1|
Domain Number 1 Region: 206-283
Classification Level Classification E-value
Superfamily TrkA C-terminal domain-like 1.31e-16
Family TrkA C-terminal domain-like 0.0067
Further Details:      
 
Domain Number 2 Region: 290-349
Classification Level Classification E-value
Superfamily TrkA C-terminal domain-like 0.00000000000012
Family TrkA C-terminal domain-like 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|37678597|ref|NP_933206.1|
Sequence length 574
Comment sodium/sulfate symporter [Vibrio vulnificus YJ016]
Sequence
MWEQGFVLALLLGIITCLLVTKIKPSYIFAGAAFAAFMAGMSDLTAIAANFTNSSLLTLV
LLILASTALEKTRLISWVSRSISEGRLLTVVAKLGFSTAFLSSFTNNTAVVVSLIGAIKR
NRQHAPSKLLIPLSYAAIFGGTLTLIGTSTNLIINSFVEDAGLPSLSFFTPTLIGLAIVI
GGVLVLIPLSYLLPDYDDQGQDELPYFLEAAVEPGSPLVGRSITENNLRALRKLFLAEVI
RDGQTVPSVGPDFVLQAKDRLLFCGEVDSVSTLQEIPGLTLFGQQHLNGQNFVEVVVSSS
ATFCNKTLKSSRFRDRFDAVVVAIRRGHERLEGGLGNITLAAGDTLVVVPGKRFEAERQA
HRKEFVLMNDLDSSARLDSHKSTLVLLGFMAVIAAALTGLVPIIKGLAVYLLALVVFGIV
QLNELRRRFPIDIVVIVGSALSIAQLMISSGFSERMGGMFIEAFNGWGVFGALVATYFVT
LILTELVTNNAAAALAFPLGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYS
VGNYRLLDYLKIGVPISLVYSVLVLTLIPIFFPF
Download sequence
Identical sequences A0A0H0Y5L6 A0A2J9Y456 Q7MPF1
WP_011078799.1.16238 WP_011078799.1.17874 WP_011078799.1.25536 WP_011078799.1.31968 WP_011078799.1.33883 WP_011078799.1.34622 WP_011078799.1.54486 WP_011078799.1.54603 WP_011078799.1.66581 WP_011078799.1.73066 WP_011078799.1.73173 WP_011078799.1.79678 WP_011078799.1.81460 WP_011078799.1.8379 WP_011078799.1.9921 WP_011078799.1.99976 196600.VV0413 216895.VV1_0724 gi|37678597|ref|NP_933206.1| gi|27364178|ref|NP_759706.1| gi|320157564|ref|YP_004189943.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]