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Domain assignment for VDBG_08828T0 from Verticillium albo-atrum VaMs.102

Domain architecture


Domain assignment details

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Strong hits

Sequence:  VDBG_08828T0
Domain Number 1 Region: 1-96
Classification Level Classification E-value
Superfamily Pre-PUA domain 1.05e-32
Family Nip7p homolog, N-terminal domain 0.00011
Further Details:      
 
Domain Number 2 Region: 97-172
Classification Level Classification E-value
Superfamily PUA domain-like 2.49e-21
Family PUA domain 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) VDBG_08828T0
Sequence length 185
Comment | VDBG_08828 | Verticillium albo-atrum VaMs.102 60S ribosome subunit biogenesis protein NIP7 (186 aa)
Sequence
MRPLVEEETKKVFAKLANYTGGSLKQLIQPLDNGDRYVLRLQKDRVYYVLLSIANLAVSI
ERAKLLSIGTCLGKFTKKGSFKLHITALPILAEHARYKLWVKPNGEMPLLYGSHCVKAHV
GRWTDDIPEHAGIVFYNMADVPIAFGVTARSTADAKRLDPTGIVAFRQADCGEYVRDEDT
LFSSG
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Identical sequences A0A0G4MKG2 A0A2J8E6I5 C9SVA3 G2X7M8
VDBG_08828T0 VDAG_06486T0 XP_003001032.1.67963 XP_009657159.1.79873

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